Cluster: MGYG000001030_CGC47
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001030
- CGC Family ID: CGCFAM_00544
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001030_36 | MGYG000001030_36_2 | 337 | 1125 | + | 9.B.186.1.3 |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_3 | 1177 | 3927 | - | GH92 |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_4 | 3984 | 5909 | - | CE20 | CE20 |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_5 | 6229 | 8571 | + | GH95 |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_6 | 8568 | 11147 | + | GH2 |
| TC | MGYG000001030_36 | MGYG000001030_36_7 | 11313 | 14426 | + | 1.B.14.6.1 |
| pfam | MGYG000001030_36 | MGYG000001030_36_8 | 14445 | 16034 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000001030_36 | MGYG000001030_36_9 | 16148 | 17875 | + | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_10 | 18034 | 20448 | + | GH36 |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_11 | 20467 | 22644 | + | GH92 |
| TF | MGYG000001030_36 | MGYG000001030_36_12 | 22655 | 26686 | + | HTH_AraC |
| CAZyme | MGYG000001030_36 | MGYG000001030_36_13 | 26836 | 28980 | + | GH36 |
Gene ID: MGYG000001030_36_2
Type: TC
Location: 337 - 1125 (+)
Type: TC
Location: 337 - 1125 (+)
Gene ID: MGYG000001030_36_3
Type: CAZyme
Location: 1177 - 3927 (-)
Type: CAZyme
Location: 1177 - 3927 (-)
Gene ID: MGYG000001030_36_4
Type: CAZyme
Location: 3984 - 5909 (-)
Type: CAZyme
Location: 3984 - 5909 (-)
Gene ID: MGYG000001030_36_5
Type: CAZyme
Location: 6229 - 8571 (+)
Type: CAZyme
Location: 6229 - 8571 (+)
Gene ID: MGYG000001030_36_6
Type: CAZyme
Location: 8568 - 11147 (+)
Type: CAZyme
Location: 8568 - 11147 (+)
Gene ID: MGYG000001030_36_7
Type: TC
Location: 11313 - 14426 (+)
Type: TC
Location: 11313 - 14426 (+)
Gene ID: MGYG000001030_36_8
Type: pfam
Location: 14445 - 16034 (+)
Type: pfam
Location: 14445 - 16034 (+)
Gene ID: MGYG000001030_36_9
Type: pfam
Location: 16148 - 17875 (+)
Type: pfam
Location: 16148 - 17875 (+)
Gene ID: MGYG000001030_36_10
Type: CAZyme
Location: 18034 - 20448 (+)
Type: CAZyme
Location: 18034 - 20448 (+)
Gene ID: MGYG000001030_36_11
Type: CAZyme
Location: 20467 - 22644 (+)
Type: CAZyme
Location: 20467 - 22644 (+)
Gene ID: MGYG000001030_36_12
Type: TF
Location: 22655 - 26686 (+)
Type: TF
Location: 22655 - 26686 (+)
Gene ID: MGYG000001030_36_13
Type: CAZyme
Location: 26836 - 28980 (+)
Type: CAZyme
Location: 26836 - 28980 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902468245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.