Cluster: MGYG000001027_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001027
- CGC Family ID: CGCFAM_05209
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001027_12 | MGYG000001027_12_17 | 29109 | 29642 | - | 9.B.156.3.1 |
| CAZyme | MGYG000001027_12 | MGYG000001027_12_18 | 29861 | 34456 | + | CBM32 | GH20 |
| NULL(UNKNOWN) | MGYG000001027_12 | MGYG000001027_12_19 | 34584 | 34868 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001027_12 | MGYG000001027_12_20 | 35654 | 37342 | + | GH18 |
| pfam | MGYG000001027_12 | MGYG000001027_12_21 | 37473 | 38135 | + | Amidase_3 |
| pfam | MGYG000001027_12 | MGYG000001027_12_22 | 38263 | 39060 | + | PP2C_2 |
| TC | MGYG000001027_12 | MGYG000001027_12_23 | 39073 | 40797 | + | 1.E.43.3.3 |
Gene ID: MGYG000001027_12_17
Type: TC
Location: 29109 - 29642 (-)
Type: TC
Location: 29109 - 29642 (-)
Gene ID: MGYG000001027_12_18
Type: CAZyme
Location: 29861 - 34456 (+)
Type: CAZyme
Location: 29861 - 34456 (+)
Gene ID: MGYG000001027_12_19
Type:
Location: 34584 - 34868 (+)
Type:
Location: 34584 - 34868 (+)
Gene ID: MGYG000001027_12_20
Type: CAZyme
Location: 35654 - 37342 (+)
Type: CAZyme
Location: 35654 - 37342 (+)
Gene ID: MGYG000001027_12_21
Type: pfam
Location: 37473 - 38135 (+)
Type: pfam
Location: 37473 - 38135 (+)
Gene ID: MGYG000001027_12_22
Type: pfam
Location: 38263 - 39060 (+)
Type: pfam
Location: 38263 - 39060 (+)
Gene ID: MGYG000001027_12_23
Type: TC
Location: 39073 - 40797 (+)
Type: TC
Location: 39073 - 40797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.