Cluster: MGYG000001027_CGC20
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001027
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001027_125 | MGYG000001027_125_33 | 40862 | 41779 | - | GT2 |
| pfam | MGYG000001027_125 | MGYG000001027_125_34 | 41783 | 43102 | - | LytR_cpsA_psr |
| TC | MGYG000001027_125 | MGYG000001027_125_35 | 43125 | 44525 | - | 9.B.18.1.1 |
| CAZyme | MGYG000001027_125 | MGYG000001027_125_36 | 44676 | 45635 | - | GT2 |
| CAZyme | MGYG000001027_125 | MGYG000001027_125_37 | 45651 | 47456 | - | GT2 | GT2 |
| STP | MGYG000001027_125 | MGYG000001027_125_38 | 47480 | 48610 | - | Aminotran_1_2 |
| CAZyme | MGYG000001027_125 | MGYG000001027_125_39 | 48649 | 50496 | - | GT2 | GT2 |
| pfam | MGYG000001027_125 | MGYG000001027_125_40 | 50915 | 53608 | + | YfhO |
| CAZyme | MGYG000001027_125 | MGYG000001027_125_41 | 53574 | 56240 | - | GT2 |
| pfam | MGYG000001027_125 | MGYG000001027_125_42 | 56261 | 58309 | - | RrnaAD | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 |
| TC | MGYG000001027_125 | MGYG000001027_125_43 | 58319 | 59590 | - | 3.A.1.103.6 |
| TC | MGYG000001027_125 | MGYG000001027_125_44 | 59601 | 60398 | - | 3.A.1.104.1 |
Gene ID: MGYG000001027_125_33
Type: CAZyme
Location: 40862 - 41779 (-)
Type: CAZyme
Location: 40862 - 41779 (-)
Gene ID: MGYG000001027_125_34
Type: pfam
Location: 41783 - 43102 (-)
Type: pfam
Location: 41783 - 43102 (-)
Gene ID: MGYG000001027_125_35
Type: TC
Location: 43125 - 44525 (-)
Type: TC
Location: 43125 - 44525 (-)
Gene ID: MGYG000001027_125_36
Type: CAZyme
Location: 44676 - 45635 (-)
Type: CAZyme
Location: 44676 - 45635 (-)
Gene ID: MGYG000001027_125_37
Type: CAZyme
Location: 45651 - 47456 (-)
Type: CAZyme
Location: 45651 - 47456 (-)
Gene ID: MGYG000001027_125_38
Type: STP
Location: 47480 - 48610 (-)
Type: STP
Location: 47480 - 48610 (-)
Gene ID: MGYG000001027_125_39
Type: CAZyme
Location: 48649 - 50496 (-)
Type: CAZyme
Location: 48649 - 50496 (-)
Gene ID: MGYG000001027_125_40
Type: pfam
Location: 50915 - 53608 (+)
Type: pfam
Location: 50915 - 53608 (+)
Gene ID: MGYG000001027_125_41
Type: CAZyme
Location: 53574 - 56240 (-)
Type: CAZyme
Location: 53574 - 56240 (-)
Gene ID: MGYG000001027_125_42
Type: pfam
Location: 56261 - 58309 (-)
Type: pfam
Location: 56261 - 58309 (-)
Gene ID: MGYG000001027_125_43
Type: TC
Location: 58319 - 59590 (-)
Type: TC
Location: 58319 - 59590 (-)
Gene ID: MGYG000001027_125_44
Type: TC
Location: 59601 - 60398 (-)
Type: TC
Location: 59601 - 60398 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.