Cluster: MGYG000001022_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001022
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001022_62 | MGYG000001022_62_14 | 19527 | 20276 | + | 9.B.18.1.2 |
| pfam | MGYG000001022_62 | MGYG000001022_62_15 | 20337 | 20744 | + | Alg14 |
| pfam | MGYG000001022_62 | MGYG000001022_62_16 | 20756 | 21241 | + | Glyco_tran_28_C |
| CAZyme | MGYG000001022_62 | MGYG000001022_62_17 | 21246 | 22013 | + | GT32 |
| CAZyme | MGYG000001022_62 | MGYG000001022_62_18 | 22013 | 22909 | + | GT2 |
| NULL(UNKNOWN) | MGYG000001022_62 | MGYG000001022_62_19 | 22906 | 24048 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000001022_62 | MGYG000001022_62_20 | 24393 | 24557 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001022_62 | MGYG000001022_62_21 | 24565 | 25509 | + | GT2 |
| NULL(UNKNOWN) | MGYG000001022_62 | MGYG000001022_62_22 | 25517 | 26419 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000001022_62 | MGYG000001022_62_23 | 26355 | 26942 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001022_62 | MGYG000001022_62_24 | 26959 | 28350 | + | 2.A.66.2.23 |
Gene ID: MGYG000001022_62_14
Type: TC
Location: 19527 - 20276 (+)
Type: TC
Location: 19527 - 20276 (+)
Gene ID: MGYG000001022_62_15
Type: pfam
Location: 20337 - 20744 (+)
Type: pfam
Location: 20337 - 20744 (+)
Gene ID: MGYG000001022_62_16
Type: pfam
Location: 20756 - 21241 (+)
Type: pfam
Location: 20756 - 21241 (+)
Gene ID: MGYG000001022_62_17
Type: CAZyme
Location: 21246 - 22013 (+)
Type: CAZyme
Location: 21246 - 22013 (+)
Gene ID: MGYG000001022_62_18
Type: CAZyme
Location: 22013 - 22909 (+)
Type: CAZyme
Location: 22013 - 22909 (+)
Gene ID: MGYG000001022_62_19
Type:
Location: 22906 - 24048 (+)
Type:
Location: 22906 - 24048 (+)
Gene ID: MGYG000001022_62_20
Type:
Location: 24393 - 24557 (+)
Type:
Location: 24393 - 24557 (+)
Gene ID: MGYG000001022_62_21
Type: CAZyme
Location: 24565 - 25509 (+)
Type: CAZyme
Location: 24565 - 25509 (+)
Gene ID: MGYG000001022_62_22
Type:
Location: 25517 - 26419 (+)
Type:
Location: 25517 - 26419 (+)
Gene ID: MGYG000001022_62_23
Type:
Location: 26355 - 26942 (-)
Type:
Location: 26355 - 26942 (-)
Gene ID: MGYG000001022_62_24
Type: TC
Location: 26959 - 28350 (+)
Type: TC
Location: 26959 - 28350 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900751695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.