Cluster: MGYG000001022_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001022
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001022_6 | MGYG000001022_6_7 | 6751 | 7710 | - | GT2 |
| pfam | MGYG000001022_6 | MGYG000001022_6_8 | 7816 | 8355 | - | Hexapep | Hexapep_2 |
| pfam | MGYG000001022_6 | MGYG000001022_6_9 | 8434 | 9093 | - | DUF1919 |
| CAZyme | MGYG000001022_6 | MGYG000001022_6_10 | 9090 | 10235 | - | GT4 |
| CAZyme | MGYG000001022_6 | MGYG000001022_6_11 | 10237 | 11358 | - | GT4 |
| NULL(UNKNOWN) | MGYG000001022_6 | MGYG000001022_6_12 | 11351 | 11677 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001022_6 | MGYG000001022_6_13 | 11674 | 12522 | - | GT2 |
| TC | MGYG000001022_6 | MGYG000001022_6_14 | 12525 | 13289 | - | 9.B.18.1.2 |
Gene ID: MGYG000001022_6_7
Type: CAZyme
Location: 6751 - 7710 (-)
Type: CAZyme
Location: 6751 - 7710 (-)
Gene ID: MGYG000001022_6_8
Type: pfam
Location: 7816 - 8355 (-)
Type: pfam
Location: 7816 - 8355 (-)
Gene ID: MGYG000001022_6_9
Type: pfam
Location: 8434 - 9093 (-)
Type: pfam
Location: 8434 - 9093 (-)
Gene ID: MGYG000001022_6_10
Type: CAZyme
Location: 9090 - 10235 (-)
Type: CAZyme
Location: 9090 - 10235 (-)
Gene ID: MGYG000001022_6_11
Type: CAZyme
Location: 10237 - 11358 (-)
Type: CAZyme
Location: 10237 - 11358 (-)
Gene ID: MGYG000001022_6_12
Type:
Location: 11351 - 11677 (-)
Type:
Location: 11351 - 11677 (-)
Gene ID: MGYG000001022_6_13
Type: CAZyme
Location: 11674 - 12522 (-)
Type: CAZyme
Location: 11674 - 12522 (-)
Gene ID: MGYG000001022_6_14
Type: TC
Location: 12525 - 13289 (-)
Type: TC
Location: 12525 - 13289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900751695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.