Cluster: MGYG000001019_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001019
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001019_109 | MGYG000001019_109_10 | 8657 | 10015 | - | 2.A.33.1.1 |
| pfam | MGYG000001019_109 | MGYG000001019_109_11 | 10284 | 11207 | - | DHH | DHHA2 |
| STP | MGYG000001019_109 | MGYG000001019_109_12 | 11355 | 12308 | - | Glucokinase |
| TC | MGYG000001019_109 | MGYG000001019_109_13 | 12550 | 12882 | - | 4.A.3.2.3 |
| TC | MGYG000001019_109 | MGYG000001019_109_14 | 12892 | 13194 | - | 4.A.3.2.9 |
| TC | MGYG000001019_109 | MGYG000001019_109_15 | 13356 | 14699 | - | 4.A.3.2.9 |
| CAZyme | MGYG000001019_109 | MGYG000001019_109_16 | 14820 | 16220 | - | GH1 |
Gene ID: MGYG000001019_109_10
Type: TC
Location: 8657 - 10015 (-)
Type: TC
Location: 8657 - 10015 (-)
Gene ID: MGYG000001019_109_11
Type: pfam
Location: 10284 - 11207 (-)
Type: pfam
Location: 10284 - 11207 (-)
Gene ID: MGYG000001019_109_12
Type: STP
Location: 11355 - 12308 (-)
Type: STP
Location: 11355 - 12308 (-)
Gene ID: MGYG000001019_109_13
Type: TC
Location: 12550 - 12882 (-)
Type: TC
Location: 12550 - 12882 (-)
Gene ID: MGYG000001019_109_14
Type: TC
Location: 12892 - 13194 (-)
Type: TC
Location: 12892 - 13194 (-)
Gene ID: MGYG000001019_109_15
Type: TC
Location: 13356 - 14699 (-)
Type: TC
Location: 13356 - 14699 (-)
Gene ID: MGYG000001019_109_16
Type: CAZyme
Location: 14820 - 16220 (-)
Type: CAZyme
Location: 14820 - 16220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900751755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001019_109_14 | vegan > omnivore | 1.04837 | 0.00863 |