Cluster: MGYG000001010_CGC2
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001010
- CGC Family ID: CGCFAM_00394
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001010_2 | MGYG000001010_2_4 | 6703 | 8310 | + | 2.A.66.2.14 |
| pfam | MGYG000001010_2 | MGYG000001010_2_5 | 8294 | 9076 | + | PRA-PH | MazG | MazG |
| pfam | MGYG000001010_2 | MGYG000001010_2_6 | 9128 | 9427 | + | Bac_DNA_binding | HU-HIG |
| CAZyme | MGYG000001010_2 | MGYG000001010_2_7 | 9510 | 10664 | + | GT28 |
| NULL(UNKNOWN) | MGYG000001010_2 | MGYG000001010_2_8 | 10826 | 11146 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001010_2 | MGYG000001010_2_9 | 11259 | 13265 | + | 3.A.1.120.6 |
| STP | MGYG000001010_2 | MGYG000001010_2_10 | 13398 | 14867 | + | Fer4 |
| pfam | MGYG000001010_2 | MGYG000001010_2_11 | 15198 | 15827 | + | PhoU_div |
| TC | MGYG000001010_2 | MGYG000001010_2_12 | 15820 | 16818 | + | 2.A.20.1.5 |
| NULL(UNKNOWN) | MGYG000001010_2 | MGYG000001010_2_13 | 17252 | 17425 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001010_2 | MGYG000001010_2_14 | 17698 | 18162 | + | 4.A.7.1.1 |
| TC | MGYG000001010_2 | MGYG000001010_2_15 | 18175 | 18450 | + | 4.A.7.1.2 |
| TC | MGYG000001010_2 | MGYG000001010_2_16 | 18480 | 19847 | + | 4.A.7.1.4 |
| pfam | MGYG000001010_2 | MGYG000001010_2_17 | 19847 | 20242 | + | DUF454 |
| TF | MGYG000001010_2 | MGYG000001010_2_18 | 20467 | 21315 | + | HTH_AraC |
| TC | MGYG000001010_2 | MGYG000001010_2_19 | 21497 | 26581 | + | 1.B.14.1.4 |
| TC | MGYG000001010_2 | MGYG000001010_2_20 | 26617 | 27234 | + | 1.A.30.2.9 |
Gene ID: MGYG000001010_2_4
Type: TC
Location: 6703 - 8310 (+)
Type: TC
Location: 6703 - 8310 (+)
Gene ID: MGYG000001010_2_5
Type: pfam
Location: 8294 - 9076 (+)
Type: pfam
Location: 8294 - 9076 (+)
Gene ID: MGYG000001010_2_6
Type: pfam
Location: 9128 - 9427 (+)
Type: pfam
Location: 9128 - 9427 (+)
Gene ID: MGYG000001010_2_7
Type: CAZyme
Location: 9510 - 10664 (+)
Type: CAZyme
Location: 9510 - 10664 (+)
Gene ID: MGYG000001010_2_8
Type:
Location: 10826 - 11146 (-)
Type:
Location: 10826 - 11146 (-)
Gene ID: MGYG000001010_2_9
Type: TC
Location: 11259 - 13265 (+)
Type: TC
Location: 11259 - 13265 (+)
Gene ID: MGYG000001010_2_10
Type: STP
Location: 13398 - 14867 (+)
Type: STP
Location: 13398 - 14867 (+)
Gene ID: MGYG000001010_2_11
Type: pfam
Location: 15198 - 15827 (+)
Type: pfam
Location: 15198 - 15827 (+)
Gene ID: MGYG000001010_2_12
Type: TC
Location: 15820 - 16818 (+)
Type: TC
Location: 15820 - 16818 (+)
Gene ID: MGYG000001010_2_13
Type:
Location: 17252 - 17425 (+)
Type:
Location: 17252 - 17425 (+)
Gene ID: MGYG000001010_2_14
Type: TC
Location: 17698 - 18162 (+)
Type: TC
Location: 17698 - 18162 (+)
Gene ID: MGYG000001010_2_15
Type: TC
Location: 18175 - 18450 (+)
Type: TC
Location: 18175 - 18450 (+)
Gene ID: MGYG000001010_2_16
Type: TC
Location: 18480 - 19847 (+)
Type: TC
Location: 18480 - 19847 (+)
Gene ID: MGYG000001010_2_17
Type: pfam
Location: 19847 - 20242 (+)
Type: pfam
Location: 19847 - 20242 (+)
Gene ID: MGYG000001010_2_18
Type: TF
Location: 20467 - 21315 (+)
Type: TF
Location: 20467 - 21315 (+)
Gene ID: MGYG000001010_2_19
Type: TC
Location: 21497 - 26581 (+)
Type: TC
Location: 21497 - 26581 (+)
Gene ID: MGYG000001010_2_20
Type: TC
Location: 26617 - 27234 (+)
Type: TC
Location: 26617 - 27234 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900538355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.