Cluster: MGYG000001004_CGC5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001004
- CGC Family ID: CGCFAM_00011
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001004_3 | MGYG000001004_3_36 | 47712 | 49523 | - | GT2 |
| TC | MGYG000001004_3 | MGYG000001004_3_37 | 49626 | 50378 | - | 3.A.1.103.1 |
| TC | MGYG000001004_3 | MGYG000001004_3_38 | 50394 | 51182 | - | 3.A.1.103.4 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_39 | 51179 | 52186 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_40 | 52179 | 53312 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_41 | 53394 | 54527 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_42 | 54714 | 55898 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_43 | 55914 | 56687 | - | GT2 |
| TC | MGYG000001004_3 | MGYG000001004_3_44 | 56687 | 58075 | - | 9.B.18.1.3 |
Gene ID: MGYG000001004_3_36
Type: CAZyme
Location: 47712 - 49523 (-)
Type: CAZyme
Location: 47712 - 49523 (-)
Gene ID: MGYG000001004_3_37
Type: TC
Location: 49626 - 50378 (-)
Type: TC
Location: 49626 - 50378 (-)
Gene ID: MGYG000001004_3_38
Type: TC
Location: 50394 - 51182 (-)
Type: TC
Location: 50394 - 51182 (-)
Gene ID: MGYG000001004_3_39
Type: CAZyme
Location: 51179 - 52186 (-)
Type: CAZyme
Location: 51179 - 52186 (-)
Gene ID: MGYG000001004_3_40
Type: CAZyme
Location: 52179 - 53312 (-)
Type: CAZyme
Location: 52179 - 53312 (-)
Gene ID: MGYG000001004_3_41
Type: CAZyme
Location: 53394 - 54527 (-)
Type: CAZyme
Location: 53394 - 54527 (-)
Gene ID: MGYG000001004_3_42
Type: CAZyme
Location: 54714 - 55898 (-)
Type: CAZyme
Location: 54714 - 55898 (-)
Gene ID: MGYG000001004_3_43
Type: CAZyme
Location: 55914 - 56687 (-)
Type: CAZyme
Location: 55914 - 56687 (-)
Gene ID: MGYG000001004_3_44
Type: TC
Location: 56687 - 58075 (-)
Type: TC
Location: 56687 - 58075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.