Cluster: MGYG000001004_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001004
- CGC Family ID: CGCFAM_04000
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001004_3 | MGYG000001004_3_9 | 14337 | 15308 | - | GT2 |
| pfam | MGYG000001004_3 | MGYG000001004_3_10 | 15314 | 16321 | - | Acyl_transf_3 |
| TC | MGYG000001004_3 | MGYG000001004_3_11 | 16344 | 17378 | - | 9.B.97.6.2 |
| pfam | MGYG000001004_3 | MGYG000001004_3_12 | 17382 | 17762 | - | DUF2304 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_13 | 17775 | 18461 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_14 | 18458 | 19270 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_15 | 19394 | 20590 | - | GT4 |
| STP | MGYG000001004_3 | MGYG000001004_3_16 | 20581 | 21714 | - | Aminotran_1_2 |
| pfam | MGYG000001004_3 | MGYG000001004_3_17 | 21701 | 22285 | - | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_18 | 22278 | 23357 | - | GH177 |
| pfam | MGYG000001004_3 | MGYG000001004_3_19 | 23394 | 24518 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_20 | 24523 | 25416 | - | GT2 |
| CAZyme | MGYG000001004_3 | MGYG000001004_3_21 | 25428 | 26471 | - | GT2 |
Gene ID: MGYG000001004_3_9
Type: CAZyme
Location: 14337 - 15308 (-)
Type: CAZyme
Location: 14337 - 15308 (-)
Gene ID: MGYG000001004_3_10
Type: pfam
Location: 15314 - 16321 (-)
Type: pfam
Location: 15314 - 16321 (-)
Gene ID: MGYG000001004_3_11
Type: TC
Location: 16344 - 17378 (-)
Type: TC
Location: 16344 - 17378 (-)
Gene ID: MGYG000001004_3_12
Type: pfam
Location: 17382 - 17762 (-)
Type: pfam
Location: 17382 - 17762 (-)
Gene ID: MGYG000001004_3_13
Type: CAZyme
Location: 17775 - 18461 (-)
Type: CAZyme
Location: 17775 - 18461 (-)
Gene ID: MGYG000001004_3_14
Type: CAZyme
Location: 18458 - 19270 (-)
Type: CAZyme
Location: 18458 - 19270 (-)
Gene ID: MGYG000001004_3_15
Type: CAZyme
Location: 19394 - 20590 (-)
Type: CAZyme
Location: 19394 - 20590 (-)
Gene ID: MGYG000001004_3_16
Type: STP
Location: 20581 - 21714 (-)
Type: STP
Location: 20581 - 21714 (-)
Gene ID: MGYG000001004_3_17
Type: pfam
Location: 21701 - 22285 (-)
Type: pfam
Location: 21701 - 22285 (-)
Gene ID: MGYG000001004_3_18
Type: CAZyme
Location: 22278 - 23357 (-)
Type: CAZyme
Location: 22278 - 23357 (-)
Gene ID: MGYG000001004_3_19
Type: pfam
Location: 23394 - 24518 (-)
Type: pfam
Location: 23394 - 24518 (-)
Gene ID: MGYG000001004_3_20
Type: CAZyme
Location: 24523 - 25416 (-)
Type: CAZyme
Location: 24523 - 25416 (-)
Gene ID: MGYG000001004_3_21
Type: CAZyme
Location: 25428 - 26471 (-)
Type: CAZyme
Location: 25428 - 26471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.