Cluster: MGYG000001004_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001004
- CGC Family ID: CGCFAM_00039
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001004_72 | MGYG000001004_72_4 | 3937 | 4869 | - | GT2 |
| pfam | MGYG000001004_72 | MGYG000001004_72_5 | 4871 | 6271 | - | LytR_cpsA_psr |
| TC | MGYG000001004_72 | MGYG000001004_72_6 | 6287 | 7687 | - | 9.B.18.1.1 |
| CAZyme | MGYG000001004_72 | MGYG000001004_72_7 | 7854 | 8810 | - | GT2 |
| CAZyme | MGYG000001004_72 | MGYG000001004_72_8 | 8822 | 10627 | - | GT2 | GT2 |
| STP | MGYG000001004_72 | MGYG000001004_72_9 | 10685 | 11812 | - | Aminotran_1_2 |
| CAZyme | MGYG000001004_72 | MGYG000001004_72_10 | 11867 | 13702 | - | GT2 | GT2 |
Gene ID: MGYG000001004_72_4
Type: CAZyme
Location: 3937 - 4869 (-)
Type: CAZyme
Location: 3937 - 4869 (-)
Gene ID: MGYG000001004_72_5
Type: pfam
Location: 4871 - 6271 (-)
Type: pfam
Location: 4871 - 6271 (-)
Gene ID: MGYG000001004_72_6
Type: TC
Location: 6287 - 7687 (-)
Type: TC
Location: 6287 - 7687 (-)
Gene ID: MGYG000001004_72_7
Type: CAZyme
Location: 7854 - 8810 (-)
Type: CAZyme
Location: 7854 - 8810 (-)
Gene ID: MGYG000001004_72_8
Type: CAZyme
Location: 8822 - 10627 (-)
Type: CAZyme
Location: 8822 - 10627 (-)
Gene ID: MGYG000001004_72_9
Type: STP
Location: 10685 - 11812 (-)
Type: STP
Location: 10685 - 11812 (-)
Gene ID: MGYG000001004_72_10
Type: CAZyme
Location: 11867 - 13702 (-)
Type: CAZyme
Location: 11867 - 13702 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.