Cluster: MGYG000001004_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001004
- CGC Family ID: CGCFAM_06275
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001004_48 | MGYG000001004_48_7 | 6820 | 10950 | + | CBM51 |
| CAZyme | MGYG000001004_48 | MGYG000001004_48_8 | 11189 | 15379 | + | GH33 |
| TC | MGYG000001004_48 | MGYG000001004_48_9 | 15761 | 16369 | + | 9.B.156.3.1 |
| STP | MGYG000001004_48 | MGYG000001004_48_10 | 16668 | 17249 | + | Pribosyltran |
| pfam | MGYG000001004_48 | MGYG000001004_48_11 | 17292 | 18089 | - | RelA_SpoT |
| TC | MGYG000001004_48 | MGYG000001004_48_12 | 18175 | 19425 | - | 2.A.23.4.1 |
Gene ID: MGYG000001004_48_7
Type: CAZyme
Location: 6820 - 10950 (+)
Type: CAZyme
Location: 6820 - 10950 (+)
Gene ID: MGYG000001004_48_8
Type: CAZyme
Location: 11189 - 15379 (+)
Type: CAZyme
Location: 11189 - 15379 (+)
Gene ID: MGYG000001004_48_9
Type: TC
Location: 15761 - 16369 (+)
Type: TC
Location: 15761 - 16369 (+)
Gene ID: MGYG000001004_48_10
Type: STP
Location: 16668 - 17249 (+)
Type: STP
Location: 16668 - 17249 (+)
Gene ID: MGYG000001004_48_11
Type: pfam
Location: 17292 - 18089 (-)
Type: pfam
Location: 17292 - 18089 (-)
Gene ID: MGYG000001004_48_12
Type: TC
Location: 18175 - 19425 (-)
Type: TC
Location: 18175 - 19425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.