Cluster: MGYG000001004_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001004
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001004_24 | MGYG000001004_24_18 | 19810 | 20811 | - | 3.A.1.2.17 |
| TC | MGYG000001004_24 | MGYG000001004_24_19 | 20814 | 21917 | - | 3.A.1.2.12 |
| TC | MGYG000001004_24 | MGYG000001004_24_20 | 21910 | 23445 | - | 3.A.1.2.12 |
| pfam | MGYG000001004_24 | MGYG000001004_24_21 | 23596 | 24846 | - | Bmp |
| TF | MGYG000001004_24 | MGYG000001004_24_22 | 25281 | 25481 | + | CSD |
| CAZyme | MGYG000001004_24 | MGYG000001004_24_23 | 25656 | 29318 | - | CBM32 | GH20 |
Gene ID: MGYG000001004_24_18
Type: TC
Location: 19810 - 20811 (-)
Type: TC
Location: 19810 - 20811 (-)
Gene ID: MGYG000001004_24_19
Type: TC
Location: 20814 - 21917 (-)
Type: TC
Location: 20814 - 21917 (-)
Gene ID: MGYG000001004_24_20
Type: TC
Location: 21910 - 23445 (-)
Type: TC
Location: 21910 - 23445 (-)
Gene ID: MGYG000001004_24_21
Type: pfam
Location: 23596 - 24846 (-)
Type: pfam
Location: 23596 - 24846 (-)
Gene ID: MGYG000001004_24_22
Type: TF
Location: 25281 - 25481 (+)
Type: TF
Location: 25281 - 25481 (+)
Gene ID: MGYG000001004_24_23
Type: CAZyme
Location: 25656 - 29318 (-)
Type: CAZyme
Location: 25656 - 29318 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001004_24_21 | vegetarian > vegan | 1.29261 | 0.00181 |
| MGYG000001004_24_22 | vegan > omnivore | 1.37886 | 0.02242 |