Cluster: MGYG000001004_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001004
- CGC Family ID: CGCFAM_00199
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001004_14 | MGYG000001004_14_26 | 30179 | 32173 | + | GH31_1 |
| TF | MGYG000001004_14 | MGYG000001004_14_27 | 32203 | 33045 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001004_14 | MGYG000001004_14_28 | 33285 | 34583 | + | 3.A.1.1.28 |
| TC | MGYG000001004_14 | MGYG000001004_14_29 | 34580 | 35455 | + | 3.A.1.1.45 |
| TC | MGYG000001004_14 | MGYG000001004_14_30 | 35452 | 36294 | + | 3.A.1.1.28 |
| CAZyme | MGYG000001004_14 | MGYG000001004_14_31 | 36410 | 38596 | + | GH36 |
| CAZyme | MGYG000001004_14 | MGYG000001004_14_32 | 38667 | 40520 | + | GH13_4 |
Gene ID: MGYG000001004_14_26
Type: CAZyme
Location: 30179 - 32173 (+)
Type: CAZyme
Location: 30179 - 32173 (+)
Gene ID: MGYG000001004_14_27
Type: TF
Location: 32203 - 33045 (-)
Type: TF
Location: 32203 - 33045 (-)
Gene ID: MGYG000001004_14_28
Type: TC
Location: 33285 - 34583 (+)
Type: TC
Location: 33285 - 34583 (+)
Gene ID: MGYG000001004_14_29
Type: TC
Location: 34580 - 35455 (+)
Type: TC
Location: 34580 - 35455 (+)
Gene ID: MGYG000001004_14_30
Type: TC
Location: 35452 - 36294 (+)
Type: TC
Location: 35452 - 36294 (+)
Gene ID: MGYG000001004_14_31
Type: CAZyme
Location: 36410 - 38596 (+)
Type: CAZyme
Location: 36410 - 38596 (+)
Gene ID: MGYG000001004_14_32
Type: CAZyme
Location: 38667 - 40520 (+)
Type: CAZyme
Location: 38667 - 40520 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.