Cluster: MGYG000001004_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001004
- CGC Family ID: CGCFAM_06276
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001004_1 | MGYG000001004_1_1 | 279 | 638 | + | 1.E.14.1.17 |
| TC | MGYG000001004_1 | MGYG000001004_1_2 | 640 | 1332 | + | 2.A.122.1.4 |
| CAZyme | MGYG000001004_1 | MGYG000001004_1_3 | 1508 | 7798 | + | GH101 |
| TC | MGYG000001004_1 | MGYG000001004_1_4 | 7980 | 9296 | - | 2.A.40.1.1 |
| pfam | MGYG000001004_1 | MGYG000001004_1_5 | 9603 | 10937 | - | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | MGYG000001004_1 | MGYG000001004_1_6 | 11393 | 13783 | + | 3.A.3.23.2 |
Gene ID: MGYG000001004_1_1
Type: TC
Location: 279 - 638 (+)
Type: TC
Location: 279 - 638 (+)
Gene ID: MGYG000001004_1_2
Type: TC
Location: 640 - 1332 (+)
Type: TC
Location: 640 - 1332 (+)
Gene ID: MGYG000001004_1_3
Type: CAZyme
Location: 1508 - 7798 (+)
Type: CAZyme
Location: 1508 - 7798 (+)
Gene ID: MGYG000001004_1_4
Type: TC
Location: 7980 - 9296 (-)
Type: TC
Location: 7980 - 9296 (-)
Gene ID: MGYG000001004_1_5
Type: pfam
Location: 9603 - 10937 (-)
Type: pfam
Location: 9603 - 10937 (-)
Gene ID: MGYG000001004_1_6
Type: TC
Location: 11393 - 13783 (+)
Type: TC
Location: 11393 - 13783 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.