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Cluster: MGYG000001003_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001003_11 MGYG000001003_11_23 18941 20362 - GH1
TC MGYG000001003_11 MGYG000001003_11_24 20439 21359 - 4.A.3.1.1
TC MGYG000001003_11 MGYG000001003_11_25 21299 22216 - 4.A.3.1.1
TF MGYG000001003_11 MGYG000001003_11_26 22501 23502 + LacI
TC MGYG000001003_11 MGYG000001003_11_27 23837 25597 - 4.A.3.1.1
CAZyme MGYG000001003_11 MGYG000001003_11_28 25774 27216 - GH1
TF MGYG000001003_11 MGYG000001003_11_29 27558 28595 + LacI
CAZyme MGYG000001003_11 MGYG000001003_11_30 28857 30296 - GH1
TC MGYG000001003_11 MGYG000001003_11_31 30363 32129 - 4.A.3.1.1
TF MGYG000001003_11 MGYG000001003_11_32 32487 33491 + LacI
TC MGYG000001003_11 MGYG000001003_11_33 33706 34044 + 4.A.3.1.2
Gene ID: MGYG000001003_11_23
Type: CAZyme
Location: 18941 - 20362 (-)
Gene ID: MGYG000001003_11_24
Type: TC
Location: 20439 - 21359 (-)
Gene ID: MGYG000001003_11_25
Type: TC
Location: 21299 - 22216 (-)
Gene ID: MGYG000001003_11_26
Type: TF
Location: 22501 - 23502 (+)
Gene ID: MGYG000001003_11_27
Type: TC
Location: 23837 - 25597 (-)
Gene ID: MGYG000001003_11_28
Type: CAZyme
Location: 25774 - 27216 (-)
Gene ID: MGYG000001003_11_29
Type: TF
Location: 27558 - 28595 (+)
Gene ID: MGYG000001003_11_30
Type: CAZyme
Location: 28857 - 30296 (-)
Gene ID: MGYG000001003_11_31
Type: TC
Location: 30363 - 32129 (-)
Gene ID: MGYG000001003_11_32
Type: TF
Location: 32487 - 33491 (+)
Gene ID: MGYG000001003_11_33
Type: TC
Location: 33706 - 34044 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001003_11_29 vegetarian > omnivore 1.04438 0.02242

🧭 Explore Read Mapping of CGC

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