dbCAN Logo

Cluster: MGYG000001003_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001003_11 MGYG000001003_11_6 4511 4954 + 4.A.6.1.16
pfam MGYG000001003_11 MGYG000001003_11_7 4954 5235 + YajC
TC MGYG000001003_11 MGYG000001003_11_8 5272 5754 + 4.A.6.1.4
TC MGYG000001003_11 MGYG000001003_11_9 5845 6645 + 4.A.6.1.4
TC MGYG000001003_11 MGYG000001003_11_10 6635 7717 + 4.A.6.1.4
TF MGYG000001003_11 MGYG000001003_11_11 7903 8634 + GntR
STP MGYG000001003_11 MGYG000001003_11_12 8749 9915 + SIS | SIS
CAZyme MGYG000001003_11 MGYG000001003_11_13 10033 11202 + CE9
Gene ID: MGYG000001003_11_6
Type: TC
Location: 4511 - 4954 (+)
Gene ID: MGYG000001003_11_7
Type: pfam
Location: 4954 - 5235 (+)
Gene ID: MGYG000001003_11_8
Type: TC
Location: 5272 - 5754 (+)
Gene ID: MGYG000001003_11_9
Type: TC
Location: 5845 - 6645 (+)
Gene ID: MGYG000001003_11_10
Type: TC
Location: 6635 - 7717 (+)
Gene ID: MGYG000001003_11_11
Type: TF
Location: 7903 - 8634 (+)
Gene ID: MGYG000001003_11_12
Type: STP
Location: 8749 - 9915 (+)
Gene ID: MGYG000001003_11_13
Type: CAZyme
Location: 10033 - 11202 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001003_11_7 vegan > omnivore 1.02900 0.00701

🧭 Explore Read Mapping of CGC

← Back to Cluster List