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Cluster: MGYG000001001_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001001_35 MGYG000001001_35_16 14888 17980 + 1.B.14.6.1
pfam MGYG000001001_35 MGYG000001001_35_17 18036 19913 + SusD_RagB | SusD-like_3
TC MGYG000001001_35 MGYG000001001_35_18 19959 22778 + 1.B.14.6.1
pfam MGYG000001001_35 MGYG000001001_35_19 22803 24575 + SusD_RagB | SusD-like_3
pfam MGYG000001001_35 MGYG000001001_35_20 24704 25687 + BT_3987-like_N | DUF5627
CAZyme MGYG000001001_35 MGYG000001001_35_21 25743 27440 + GH10
NULL(UNKNOWN) MGYG000001001_35 MGYG000001001_35_22 27603 28610 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001001_35 MGYG000001001_35_23 28725 31730 + GH98
CAZyme MGYG000001001_35 MGYG000001001_35_24 31955 33598 + GH29
Gene ID: MGYG000001001_35_16
Type: TC
Location: 14888 - 17980 (+)
Gene ID: MGYG000001001_35_17
Type: pfam
Location: 18036 - 19913 (+)
Gene ID: MGYG000001001_35_18
Type: TC
Location: 19959 - 22778 (+)
Gene ID: MGYG000001001_35_19
Type: pfam
Location: 22803 - 24575 (+)
Gene ID: MGYG000001001_35_20
Type: pfam
Location: 24704 - 25687 (+)
Gene ID: MGYG000001001_35_21
Type: CAZyme
Location: 25743 - 27440 (+)
Gene ID: MGYG000001001_35_22
Type:
Location: 27603 - 28610 (+)
Gene ID: MGYG000001001_35_23
Type: CAZyme
Location: 28725 - 31730 (+)
Gene ID: MGYG000001001_35_24
Type: CAZyme
Location: 31955 - 33598 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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