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Cluster: MGYG000001001_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001001_3 MGYG000001001_3_11 11151 13046 - 3.A.18.1.1
pfam MGYG000001001_3 MGYG000001001_3_12 13250 14017 - adh_short | KR | adh_short_C2
pfam MGYG000001001_3 MGYG000001001_3_13 14097 15590 - Polysacc_synt
TC MGYG000001001_3 MGYG000001001_3_14 15639 16865 - 9.B.156.3.1
TC MGYG000001001_3 MGYG000001001_3_15 17211 18473 + 9.B.18.1.1
CAZyme MGYG000001001_3 MGYG000001001_3_16 18597 20054 - CE20
CAZyme MGYG000001001_3 MGYG000001001_3_17 20260 21759 - GH5_4
pfam MGYG000001001_3 MGYG000001001_3_18 21778 23388 - SGBP_B_XBD
pfam MGYG000001001_3 MGYG000001001_3_19 23437 25227 - SusD_RagB | SusD-like_3
TC MGYG000001001_3 MGYG000001001_3_20 25284 28457 - 1.B.14.6.1
NULL(UNKNOWN) MGYG000001001_3 MGYG000001001_3_21 28718 29728 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001001_3 MGYG000001001_3_22 30752 32035 + CE7
CAZyme MGYG000001001_3 MGYG000001001_3_23 32072 33127 + GH26
CAZyme MGYG000001001_3 MGYG000001001_3_24 33238 34407 + GH130_1
TC MGYG000001001_3 MGYG000001001_3_25 34428 35828 + 2.A.2.3.4
Gene ID: MGYG000001001_3_11
Type: TC
Location: 11151 - 13046 (-)
Gene ID: MGYG000001001_3_12
Type: pfam
Location: 13250 - 14017 (-)
Gene ID: MGYG000001001_3_13
Type: pfam
Location: 14097 - 15590 (-)
Gene ID: MGYG000001001_3_14
Type: TC
Location: 15639 - 16865 (-)
Gene ID: MGYG000001001_3_15
Type: TC
Location: 17211 - 18473 (+)
Gene ID: MGYG000001001_3_16
Type: CAZyme
Location: 18597 - 20054 (-)
Gene ID: MGYG000001001_3_17
Type: CAZyme
Location: 20260 - 21759 (-)
Gene ID: MGYG000001001_3_18
Type: pfam
Location: 21778 - 23388 (-)
Gene ID: MGYG000001001_3_19
Type: pfam
Location: 23437 - 25227 (-)
Gene ID: MGYG000001001_3_20
Type: TC
Location: 25284 - 28457 (-)
Gene ID: MGYG000001001_3_21
Type:
Location: 28718 - 29728 (-)
Gene ID: MGYG000001001_3_22
Type: CAZyme
Location: 30752 - 32035 (+)
Gene ID: MGYG000001001_3_23
Type: CAZyme
Location: 32072 - 33127 (+)
Gene ID: MGYG000001001_3_24
Type: CAZyme
Location: 33238 - 34407 (+)
Gene ID: MGYG000001001_3_25
Type: TC
Location: 34428 - 35828 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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