Cluster: MGYG000000995_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000995
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000995_3 | MGYG000000995_3_73 | 89721 | 91175 | - | GH1 |
| TC | MGYG000000995_3 | MGYG000000995_3_74 | 91177 | 92526 | - | 4.A.3.2.6 |
| TC | MGYG000000995_3 | MGYG000000995_3_75 | 92536 | 92829 | - | 4.A.3.2.6 |
| TC | MGYG000000995_3 | MGYG000000995_3_76 | 92876 | 93202 | - | 4.A.3.2.7 |
Gene ID: MGYG000000995_3_73
Type: CAZyme
Location: 89721 - 91175 (-)
Type: CAZyme
Location: 89721 - 91175 (-)
Gene ID: MGYG000000995_3_74
Type: TC
Location: 91177 - 92526 (-)
Type: TC
Location: 91177 - 92526 (-)
Gene ID: MGYG000000995_3_75
Type: TC
Location: 92536 - 92829 (-)
Type: TC
Location: 92536 - 92829 (-)
Gene ID: MGYG000000995_3_76
Type: TC
Location: 92876 - 93202 (-)
Type: TC
Location: 92876 - 93202 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900540985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000995_3_73 | vegetarian > vegan | 2.16082 | 0.02799 |
| MGYG000000995_3_74 | vegetarian > vegan | 1.86357 | 0.03621 |
| MGYG000000995_3_75 | vegetarian > vegan | 2.10050 | 0.03621 |