Cluster: MGYG000000993_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_4 | MGYG000000993_4_1 | 3 | 518 | + | 1.B.40.2.2 |
| CAZyme | MGYG000000993_4 | MGYG000000993_4_2 | 638 | 1498 | + | GT8 |
| STP | MGYG000000993_4 | MGYG000000993_4_3 | 1562 | 2932 | + | Pyr_redox_2 |
| peptidase | MGYG000000993_4 | MGYG000000993_4_4 | 3001 | 3828 | - | C44.UPW |
| TC | MGYG000000993_4 | MGYG000000993_4_5 | 4048 | 5364 | - | 2.A.1.15.11 |
| TC | MGYG000000993_4 | MGYG000000993_4_6 | 5379 | 6086 | - | 2.A.88.8.6 |
| TC | MGYG000000993_4 | MGYG000000993_4_7 | 6328 | 8580 | + | 1.B.14.1.3 |
Gene ID: MGYG000000993_4_1
Type: TC
Location: 3 - 518 (+)
Type: TC
Location: 3 - 518 (+)
Gene ID: MGYG000000993_4_2
Type: CAZyme
Location: 638 - 1498 (+)
Type: CAZyme
Location: 638 - 1498 (+)
Gene ID: MGYG000000993_4_3
Type: STP
Location: 1562 - 2932 (+)
Type: STP
Location: 1562 - 2932 (+)
Gene ID: MGYG000000993_4_4
Type: peptidase
Location: 3001 - 3828 (-)
Type: peptidase
Location: 3001 - 3828 (-)
Gene ID: MGYG000000993_4_5
Type: TC
Location: 4048 - 5364 (-)
Type: TC
Location: 4048 - 5364 (-)
Gene ID: MGYG000000993_4_6
Type: TC
Location: 5379 - 6086 (-)
Type: TC
Location: 5379 - 6086 (-)
Gene ID: MGYG000000993_4_7
Type: TC
Location: 6328 - 8580 (+)
Type: TC
Location: 6328 - 8580 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_4_4 | vegan > omnivore | 1.61512 | 0.00918 |