Cluster: MGYG000000993_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_3 | MGYG000000993_3_196 | 198326 | 200164 | + | 3.A.18.1.1 |
| CAZyme | MGYG000000993_3 | MGYG000000993_3_197 | 200260 | 201654 | + | GH23 |
| NULL(UNKNOWN) | MGYG000000993_3 | MGYG000000993_3_198 | 201710 | 201853 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000993_3 | MGYG000000993_3_199 | 201900 | 202223 | - | Ribosomal_S30AE |
| TC | MGYG000000993_3 | MGYG000000993_3_200 | 202469 | 203839 | - | 2.A.25.1.4 |
Gene ID: MGYG000000993_3_196
Type: TC
Location: 198326 - 200164 (+)
Type: TC
Location: 198326 - 200164 (+)
Gene ID: MGYG000000993_3_197
Type: CAZyme
Location: 200260 - 201654 (+)
Type: CAZyme
Location: 200260 - 201654 (+)
Gene ID: MGYG000000993_3_198
Type:
Location: 201710 - 201853 (+)
Type:
Location: 201710 - 201853 (+)
Gene ID: MGYG000000993_3_199
Type: pfam
Location: 201900 - 202223 (-)
Type: pfam
Location: 201900 - 202223 (-)
Gene ID: MGYG000000993_3_200
Type: TC
Location: 202469 - 203839 (-)
Type: TC
Location: 202469 - 203839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_3_197 | vegetarian > omnivore | 1.57897 | 0.00711 |
| MGYG000000993_3_198 | vegetarian > omnivore | 1.53925 | 0.00711 |