Cluster: MGYG000000993_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000993_1 | MGYG000000993_1_358 | 390168 | 393194 | - | GH2 |
| pfam | MGYG000000993_1 | MGYG000000993_1_359 | 393316 | 394515 | - | PMI_typeI_cat | MPI_cupin_dom |
| TC | MGYG000000993_1 | MGYG000000993_1_360 | 394588 | 395088 | - | 4.A.1.1.1 |
| TC | MGYG000000993_1 | MGYG000000993_1_361 | 395148 | 396875 | - | 8.A.7.1.1 |
| TC | MGYG000000993_1 | MGYG000000993_1_362 | 396955 | 397212 | - | 8.A.8.1.1 |
Gene ID: MGYG000000993_1_358
Type: CAZyme
Location: 390168 - 393194 (-)
Type: CAZyme
Location: 390168 - 393194 (-)
Gene ID: MGYG000000993_1_359
Type: pfam
Location: 393316 - 394515 (-)
Type: pfam
Location: 393316 - 394515 (-)
Gene ID: MGYG000000993_1_360
Type: TC
Location: 394588 - 395088 (-)
Type: TC
Location: 394588 - 395088 (-)
Gene ID: MGYG000000993_1_361
Type: TC
Location: 395148 - 396875 (-)
Type: TC
Location: 395148 - 396875 (-)
Gene ID: MGYG000000993_1_362
Type: TC
Location: 396955 - 397212 (-)
Type: TC
Location: 396955 - 397212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_1_360 | vegan > omnivore | 2.92638 | 0.00918 |
| MGYG000000993_1_360 | vegetarian > omnivore | 2.28693 | 0.00711 |
| MGYG000000993_1_361 | vegan > omnivore | 1.13309 | 0.00918 |
| MGYG000000993_1_361 | vegetarian > omnivore | 1.08244 | 0.00711 |
| MGYG000000993_1_362 | vegetarian > omnivore | 1.02217 | 0.00711 |