Cluster: MGYG000000993_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_9 | MGYG000000993_9_20 | 20699 | 21472 | - | 3.A.1.14.19 |
| TC | MGYG000000993_9 | MGYG000000993_9_21 | 21472 | 22521 | - | 3.A.1.14.5 |
| STP | MGYG000000993_9 | MGYG000000993_9_22 | 22537 | 23652 | - | Peripla_BP_2 |
| pfam | MGYG000000993_9 | MGYG000000993_9_23 | 23749 | 24888 | - | CCP_MauG |
| CAZyme | MGYG000000993_9 | MGYG000000993_9_24 | 24968 | 26086 | - | GH103 |
| CAZyme | MGYG000000993_9 | MGYG000000993_9_25 | 26120 | 26923 | - | GT2 |
| CAZyme | MGYG000000993_9 | MGYG000000993_9_26 | 26946 | 27827 | - | GT2 |
| NULL(UNKNOWN) | MGYG000000993_9 | MGYG000000993_9_27 | 27820 | 29019 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000993_9 | MGYG000000993_9_28 | 29027 | 29797 | - | GT25 |
Gene ID: MGYG000000993_9_20
Type: TC
Location: 20699 - 21472 (-)
Type: TC
Location: 20699 - 21472 (-)
Gene ID: MGYG000000993_9_21
Type: TC
Location: 21472 - 22521 (-)
Type: TC
Location: 21472 - 22521 (-)
Gene ID: MGYG000000993_9_22
Type: STP
Location: 22537 - 23652 (-)
Type: STP
Location: 22537 - 23652 (-)
Gene ID: MGYG000000993_9_23
Type: pfam
Location: 23749 - 24888 (-)
Type: pfam
Location: 23749 - 24888 (-)
Gene ID: MGYG000000993_9_24
Type: CAZyme
Location: 24968 - 26086 (-)
Type: CAZyme
Location: 24968 - 26086 (-)
Gene ID: MGYG000000993_9_25
Type: CAZyme
Location: 26120 - 26923 (-)
Type: CAZyme
Location: 26120 - 26923 (-)
Gene ID: MGYG000000993_9_26
Type: CAZyme
Location: 26946 - 27827 (-)
Type: CAZyme
Location: 26946 - 27827 (-)
Gene ID: MGYG000000993_9_27
Type:
Location: 27820 - 29019 (-)
Type:
Location: 27820 - 29019 (-)
Gene ID: MGYG000000993_9_28
Type: CAZyme
Location: 29027 - 29797 (-)
Type: CAZyme
Location: 29027 - 29797 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_9_22 | vegan > omnivore | 1.67112 | 0.00918 |
| MGYG000000993_9_22 | vegetarian > omnivore | 1.09962 | 0.00711 |
| MGYG000000993_9_26 | vegetarian > omnivore | 2.10451 | 0.00711 |