Cluster: MGYG000000993_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000993_9 | MGYG000000993_9_7 | 7579 | 9978 | + | GT51 |
| TC | MGYG000000993_9 | MGYG000000993_9_8 | 10198 | 12102 | + | 2.A.108.2.10 |
| TC | MGYG000000993_9 | MGYG000000993_9_9 | 12131 | 12652 | + | 2.A.108.2.10 |
| pfam | MGYG000000993_9 | MGYG000000993_9_10 | 12768 | 14162 | + | YHS | FtrD-like |
| TC | MGYG000000993_9 | MGYG000000993_9_11 | 14162 | 15502 | + | 3.A.1.122.8 |
| pfam | MGYG000000993_9 | MGYG000000993_9_12 | 15489 | 16622 | + | FtsX | MacB_PCD |
| TC | MGYG000000993_9 | MGYG000000993_9_13 | 16624 | 17295 | + | 3.A.1.122.8 |
Gene ID: MGYG000000993_9_7
Type: CAZyme
Location: 7579 - 9978 (+)
Type: CAZyme
Location: 7579 - 9978 (+)
Gene ID: MGYG000000993_9_8
Type: TC
Location: 10198 - 12102 (+)
Type: TC
Location: 10198 - 12102 (+)
Gene ID: MGYG000000993_9_9
Type: TC
Location: 12131 - 12652 (+)
Type: TC
Location: 12131 - 12652 (+)
Gene ID: MGYG000000993_9_10
Type: pfam
Location: 12768 - 14162 (+)
Type: pfam
Location: 12768 - 14162 (+)
Gene ID: MGYG000000993_9_11
Type: TC
Location: 14162 - 15502 (+)
Type: TC
Location: 14162 - 15502 (+)
Gene ID: MGYG000000993_9_12
Type: pfam
Location: 15489 - 16622 (+)
Type: pfam
Location: 15489 - 16622 (+)
Gene ID: MGYG000000993_9_13
Type: TC
Location: 16624 - 17295 (+)
Type: TC
Location: 16624 - 17295 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_9_10 | vegetarian > vegan | 1.72866 | 0.02923 |