Cluster: MGYG000000993_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000993_8 | MGYG000000993_8_105 | 104136 | 105164 | + | GT9 |
| TC | MGYG000000993_8 | MGYG000000993_8_106 | 105114 | 105779 | - | 2.A.115.2.7 |
| pfam | MGYG000000993_8 | MGYG000000993_8_107 | 105970 | 107511 | + | PFL-like | YjjI-like |
| TC | MGYG000000993_8 | MGYG000000993_8_108 | 107554 | 109419 | - | 2.A.16.2.2 |
| TC | MGYG000000993_8 | MGYG000000993_8_109 | 109419 | 109724 | - | 9.B.21.2.1 |
Gene ID: MGYG000000993_8_105
Type: CAZyme
Location: 104136 - 105164 (+)
Type: CAZyme
Location: 104136 - 105164 (+)
Gene ID: MGYG000000993_8_106
Type: TC
Location: 105114 - 105779 (-)
Type: TC
Location: 105114 - 105779 (-)
Gene ID: MGYG000000993_8_107
Type: pfam
Location: 105970 - 107511 (+)
Type: pfam
Location: 105970 - 107511 (+)
Gene ID: MGYG000000993_8_108
Type: TC
Location: 107554 - 109419 (-)
Type: TC
Location: 107554 - 109419 (-)
Gene ID: MGYG000000993_8_109
Type: TC
Location: 109419 - 109724 (-)
Type: TC
Location: 109419 - 109724 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_8_105 | vegan > omnivore | 1.46438 | 0.00918 |
| MGYG000000993_8_105 | vegetarian > omnivore | 1.13133 | 0.00711 |
| MGYG000000993_8_106 | vegan > omnivore | 1.24296 | 0.00918 |
| MGYG000000993_8_106 | vegetarian > omnivore | 1.37616 | 0.00711 |