Cluster: MGYG000000993_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_7 | MGYG000000993_7_123 | 109300 | 109683 | - | 1.A.22.1.1 |
| TC | MGYG000000993_7 | MGYG000000993_7_124 | 109762 | 111138 | - | 2.A.38.1.1 |
| CAZyme | MGYG000000993_7 | MGYG000000993_7_125 | 111135 | 111950 | - | GT2 |
Gene ID: MGYG000000993_7_123
Type: TC
Location: 109300 - 109683 (-)
Type: TC
Location: 109300 - 109683 (-)
Gene ID: MGYG000000993_7_124
Type: TC
Location: 109762 - 111138 (-)
Type: TC
Location: 109762 - 111138 (-)
Gene ID: MGYG000000993_7_125
Type: CAZyme
Location: 111135 - 111950 (-)
Type: CAZyme
Location: 111135 - 111950 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_7_123 | vegan > omnivore | 1.66671 | 0.00918 |
| MGYG000000993_7_123 | vegetarian > omnivore | 3.14154 | 0.00711 |
| MGYG000000993_7_124 | vegetarian > omnivore | 1.31494 | 0.00711 |
| MGYG000000993_7_125 | vegan > omnivore | 1.61178 | 0.00918 |
| MGYG000000993_7_125 | vegetarian > omnivore | 1.01759 | 0.00711 |