Cluster: MGYG000000993_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_1 | MGYG000000993_1_254 | 273429 | 275093 | - | 4.A.1.1.11 |
| pfam | MGYG000000993_1 | MGYG000000993_1_255 | 275104 | 275895 | - | Exo_endo_phos |
| CAZyme | MGYG000000993_1 | MGYG000000993_1_256 | 275905 | 279678 | - | GH77 | GT35 |
| TF | MGYG000000993_1 | MGYG000000993_1_257 | 279874 | 280587 | + | GntR |
| TC | MGYG000000993_1 | MGYG000000993_1_258 | 280668 | 281612 | - | 2.A.16.1.2 |
Gene ID: MGYG000000993_1_254
Type: TC
Location: 273429 - 275093 (-)
Type: TC
Location: 273429 - 275093 (-)
Gene ID: MGYG000000993_1_255
Type: pfam
Location: 275104 - 275895 (-)
Type: pfam
Location: 275104 - 275895 (-)
Gene ID: MGYG000000993_1_256
Type: CAZyme
Location: 275905 - 279678 (-)
Type: CAZyme
Location: 275905 - 279678 (-)
Gene ID: MGYG000000993_1_257
Type: TF
Location: 279874 - 280587 (+)
Type: TF
Location: 279874 - 280587 (+)
Gene ID: MGYG000000993_1_258
Type: TC
Location: 280668 - 281612 (-)
Type: TC
Location: 280668 - 281612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.