Cluster: MGYG000000993_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_6 | MGYG000000993_6_92 | 90068 | 90559 | - | 9.B.105.1.1 |
| pfam | MGYG000000993_6 | MGYG000000993_6_93 | 90676 | 92046 | - | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 | Hexapep_2 |
| peptidase | MGYG000000993_6 | MGYG000000993_6_94 | 92306 | 93943 | + | C26.964 |
| CAZyme | MGYG000000993_6 | MGYG000000993_6_95 | 94066 | 95001 | + | GT2 |
Gene ID: MGYG000000993_6_92
Type: TC
Location: 90068 - 90559 (-)
Type: TC
Location: 90068 - 90559 (-)
Gene ID: MGYG000000993_6_93
Type: pfam
Location: 90676 - 92046 (-)
Type: pfam
Location: 90676 - 92046 (-)
Gene ID: MGYG000000993_6_94
Type: peptidase
Location: 92306 - 93943 (+)
Type: peptidase
Location: 92306 - 93943 (+)
Gene ID: MGYG000000993_6_95
Type: CAZyme
Location: 94066 - 95001 (+)
Type: CAZyme
Location: 94066 - 95001 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_6_92 | vegan > omnivore | 1.14211 | 0.00918 |
| MGYG000000993_6_92 | vegetarian > omnivore | 1.01758 | 0.00711 |