Cluster: MGYG000000993_CGC15
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_6 | MGYG000000993_6_48 | 44487 | 46409 | + | 1.B.14.3.1 |
| NULL(UNKNOWN) | MGYG000000993_6 | MGYG000000993_6_49 | 46483 | 47268 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000993_6 | MGYG000000993_6_50 | 47619 | 48596 | + | 3.A.1.14.20 |
| TC | MGYG000000993_6 | MGYG000000993_6_51 | 48589 | 49320 | + | 3.A.1.14.20 |
| pfam | MGYG000000993_6 | MGYG000000993_6_52 | 49368 | 49787 | - | NDK |
| peptidase | MGYG000000993_6 | MGYG000000993_6_53 | 49798 | 51099 | - | M17.004 |
| TC | MGYG000000993_6 | MGYG000000993_6_54 | 51138 | 52556 | - | 9.B.18.1.2 |
| CAZyme | MGYG000000993_6 | MGYG000000993_6_55 | 52553 | 53482 | - | GT2 |
| CAZyme | MGYG000000993_6 | MGYG000000993_6_56 | 53492 | 54376 | - | GT2 |
Gene ID: MGYG000000993_6_48
Type: TC
Location: 44487 - 46409 (+)
Type: TC
Location: 44487 - 46409 (+)
Gene ID: MGYG000000993_6_49
Type:
Location: 46483 - 47268 (+)
Type:
Location: 46483 - 47268 (+)
Gene ID: MGYG000000993_6_50
Type: TC
Location: 47619 - 48596 (+)
Type: TC
Location: 47619 - 48596 (+)
Gene ID: MGYG000000993_6_51
Type: TC
Location: 48589 - 49320 (+)
Type: TC
Location: 48589 - 49320 (+)
Gene ID: MGYG000000993_6_52
Type: pfam
Location: 49368 - 49787 (-)
Type: pfam
Location: 49368 - 49787 (-)
Gene ID: MGYG000000993_6_53
Type: peptidase
Location: 49798 - 51099 (-)
Type: peptidase
Location: 49798 - 51099 (-)
Gene ID: MGYG000000993_6_54
Type: TC
Location: 51138 - 52556 (-)
Type: TC
Location: 51138 - 52556 (-)
Gene ID: MGYG000000993_6_55
Type: CAZyme
Location: 52553 - 53482 (-)
Type: CAZyme
Location: 52553 - 53482 (-)
Gene ID: MGYG000000993_6_56
Type: CAZyme
Location: 53492 - 54376 (-)
Type: CAZyme
Location: 53492 - 54376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_6_49 | vegan > omnivore | 1.11331 | 0.00918 |
| MGYG000000993_6_50 | vegetarian > omnivore | 1.02842 | 0.00711 |
| MGYG000000993_6_52 | vegan > omnivore | 1.59825 | 0.00918 |
| MGYG000000993_6_52 | vegetarian > omnivore | 1.42366 | 0.00711 |
| MGYG000000993_6_53 | vegan > omnivore | 1.00758 | 0.00918 |