Cluster: MGYG000000993_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000993
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000993_6 | MGYG000000993_6_35 | 32133 | 33977 | - | 3.A.1.106.2 |
| TF | MGYG000000993_6 | MGYG000000993_6_36 | 34054 | 34944 | - | HTH_AraC | HTH_AraC |
| pfam | MGYG000000993_6 | MGYG000000993_6_37 | 35048 | 35392 | + | CMD |
| CAZyme | MGYG000000993_6 | MGYG000000993_6_38 | 35463 | 36518 | - | GT9 |
Gene ID: MGYG000000993_6_35
Type: TC
Location: 32133 - 33977 (-)
Type: TC
Location: 32133 - 33977 (-)
Gene ID: MGYG000000993_6_36
Type: TF
Location: 34054 - 34944 (-)
Type: TF
Location: 34054 - 34944 (-)
Gene ID: MGYG000000993_6_37
Type: pfam
Location: 35048 - 35392 (+)
Type: pfam
Location: 35048 - 35392 (+)
Gene ID: MGYG000000993_6_38
Type: CAZyme
Location: 35463 - 36518 (-)
Type: CAZyme
Location: 35463 - 36518 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900756155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000993_6_36 | vegetarian > vegan | 1.18991 | 0.04510 |
| MGYG000000993_6_37 | vegan > omnivore | 1.21645 | 0.00918 |
| MGYG000000993_6_37 | vegetarian > omnivore | 1.54138 | 0.00711 |
| MGYG000000993_6_38 | vegetarian > omnivore | 1.06060 | 0.00711 |
| MGYG000000993_6_38 | vegetarian > vegan | 1.19736 | 0.04510 |