Cluster: MGYG000000969_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000969
- CGC Family ID: CGCFAM_00179
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000969_1 | MGYG000000969_1_42 | 38459 | 40309 | - | GT5 |
| STP | MGYG000000969_1 | MGYG000000969_1_43 | 40408 | 41199 | - | Response_reg | Spo0A_C |
| TC | MGYG000000969_1 | MGYG000000969_1_44 | 41454 | 43883 | + | 3.A.3.6.10 |
| TF | MGYG000000969_1 | MGYG000000969_1_45 | 44001 | 44309 | + | HTH_5 |
| TC | MGYG000000969_1 | MGYG000000969_1_46 | 44378 | 45319 | + | 2.A.7.3.52 |
Gene ID: MGYG000000969_1_42
Type: CAZyme
Location: 38459 - 40309 (-)
Type: CAZyme
Location: 38459 - 40309 (-)
Gene ID: MGYG000000969_1_43
Type: STP
Location: 40408 - 41199 (-)
Type: STP
Location: 40408 - 41199 (-)
Gene ID: MGYG000000969_1_44
Type: TC
Location: 41454 - 43883 (+)
Type: TC
Location: 41454 - 43883 (+)
Gene ID: MGYG000000969_1_45
Type: TF
Location: 44001 - 44309 (+)
Type: TF
Location: 44001 - 44309 (+)
Gene ID: MGYG000000969_1_46
Type: TC
Location: 44378 - 45319 (+)
Type: TC
Location: 44378 - 45319 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I sp900546495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000969_1_43 | vegan > omnivore | 2.06292 | 0.00250 |
| MGYG000000969_1_43 | vegetarian > omnivore | 1.12132 | 0.00893 |