Cluster: MGYG000000969_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000969
- CGC Family ID: CGCFAM_04282
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000969_33 | MGYG000000969_33_7 | 7458 | 9206 | - | 3.A.1.135.5 |
| TC | MGYG000000969_33 | MGYG000000969_33_8 | 9326 | 11131 | - | 3.A.1.135.5 |
| CAZyme | MGYG000000969_33 | MGYG000000969_33_9 | 11187 | 12665 | - | CE4 |
| STP | MGYG000000969_33 | MGYG000000969_33_10 | 12889 | 14232 | - | SBP_bac_1 |
| pfam | MGYG000000969_33 | MGYG000000969_33_11 | 14541 | 15860 | - | MFS_1 | MFS_1 |
| TC | MGYG000000969_33 | MGYG000000969_33_12 | 16242 | 18218 | + | 8.A.59.2.1 |
Gene ID: MGYG000000969_33_7
Type: TC
Location: 7458 - 9206 (-)
Type: TC
Location: 7458 - 9206 (-)
Gene ID: MGYG000000969_33_8
Type: TC
Location: 9326 - 11131 (-)
Type: TC
Location: 9326 - 11131 (-)
Gene ID: MGYG000000969_33_9
Type: CAZyme
Location: 11187 - 12665 (-)
Type: CAZyme
Location: 11187 - 12665 (-)
Gene ID: MGYG000000969_33_10
Type: STP
Location: 12889 - 14232 (-)
Type: STP
Location: 12889 - 14232 (-)
Gene ID: MGYG000000969_33_11
Type: pfam
Location: 14541 - 15860 (-)
Type: pfam
Location: 14541 - 15860 (-)
Gene ID: MGYG000000969_33_12
Type: TC
Location: 16242 - 18218 (+)
Type: TC
Location: 16242 - 18218 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I sp900546495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000969_33_7 | vegetarian > omnivore | 1.04443 | 0.00893 |
| MGYG000000969_33_7 | vegetarian > vegan | 1.79711 | 0.01276 |