Cluster: MGYG000000959_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000959
- CGC Family ID: CGCFAM_04109
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000959_6 | MGYG000000959_6_72 | 54747 | 56411 | - | CBM35 | GH26 |
| CAZyme | MGYG000000959_6 | MGYG000000959_6_73 | 56441 | 58762 | - | GH95 |
| CAZyme | MGYG000000959_6 | MGYG000000959_6_74 | 59107 | 61002 | - | GH13_39 |
| CAZyme | MGYG000000959_6 | MGYG000000959_6_75 | 61145 | 63721 | - | GT35 |
| NULL(UNKNOWN) | MGYG000000959_6 | MGYG000000959_6_76 | 64119 | 65288 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000959_6 | MGYG000000959_6_77 | 65507 | 66307 | + | Pro_isomerase |
| TC | MGYG000000959_6 | MGYG000000959_6_78 | 66533 | 67216 | + | 3.D.1.8.1 |
Gene ID: MGYG000000959_6_72
Type: CAZyme
Location: 54747 - 56411 (-)
Type: CAZyme
Location: 54747 - 56411 (-)
Gene ID: MGYG000000959_6_73
Type: CAZyme
Location: 56441 - 58762 (-)
Type: CAZyme
Location: 56441 - 58762 (-)
Gene ID: MGYG000000959_6_74
Type: CAZyme
Location: 59107 - 61002 (-)
Type: CAZyme
Location: 59107 - 61002 (-)
Gene ID: MGYG000000959_6_75
Type: CAZyme
Location: 61145 - 63721 (-)
Type: CAZyme
Location: 61145 - 63721 (-)
Gene ID: MGYG000000959_6_76
Type:
Location: 64119 - 65288 (+)
Type:
Location: 64119 - 65288 (+)
Gene ID: MGYG000000959_6_77
Type: pfam
Location: 65507 - 66307 (+)
Type: pfam
Location: 65507 - 66307 (+)
Gene ID: MGYG000000959_6_78
Type: TC
Location: 66533 - 67216 (+)
Type: TC
Location: 66533 - 67216 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900752785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.