Cluster: MGYG000000959_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000959
- CGC Family ID: CGCFAM_01951
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000959_46 | MGYG000000959_46_12 | 6662 | 7357 | + | 1.C.82.1.1 |
| CAZyme | MGYG000000959_46 | MGYG000000959_46_13 | 7477 | 10536 | - | CBM4 | GH9 |
| CAZyme | MGYG000000959_46 | MGYG000000959_46_14 | 10820 | 13225 | - | CBM3 | GH9 |
| NULL(UNKNOWN) | MGYG000000959_46 | MGYG000000959_46_15 | 13327 | 14031 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000959_46 | MGYG000000959_46_16 | 14090 | 16066 | - | S1 | S1 | S1 | S1 | LYTB | S1_RRP5 |
| TC | MGYG000000959_46 | MGYG000000959_46_17 | 16056 | 16685 | - | 4.C.1.1.16 |
Gene ID: MGYG000000959_46_12
Type: TC
Location: 6662 - 7357 (+)
Type: TC
Location: 6662 - 7357 (+)
Gene ID: MGYG000000959_46_13
Type: CAZyme
Location: 7477 - 10536 (-)
Type: CAZyme
Location: 7477 - 10536 (-)
Gene ID: MGYG000000959_46_14
Type: CAZyme
Location: 10820 - 13225 (-)
Type: CAZyme
Location: 10820 - 13225 (-)
Gene ID: MGYG000000959_46_15
Type:
Location: 13327 - 14031 (-)
Type:
Location: 13327 - 14031 (-)
Gene ID: MGYG000000959_46_16
Type: pfam
Location: 14090 - 16066 (-)
Type: pfam
Location: 14090 - 16066 (-)
Gene ID: MGYG000000959_46_17
Type: TC
Location: 16056 - 16685 (-)
Type: TC
Location: 16056 - 16685 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900752785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.