Cluster: MGYG000000959_CGC16
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000959
- CGC Family ID: CGCFAM_00281
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000959_45 | MGYG000000959_45_3 | 1926 | 2702 | + | 3.A.1.103.4 |
| TC | MGYG000000959_45 | MGYG000000959_45_4 | 2702 | 3949 | + | 3.A.1.103.4 |
| pfam | MGYG000000959_45 | MGYG000000959_45_5 | 3946 | 5040 | + | MetW | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 |
| NULL(UNKNOWN) | MGYG000000959_45 | MGYG000000959_45_6 | 5052 | 5555 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000959_45 | MGYG000000959_45_7 | 5552 | 6637 | + | GT4 |
| CAZyme | MGYG000000959_45 | MGYG000000959_45_8 | 6634 | 7836 | + | GT4 |
| CAZyme | MGYG000000959_45 | MGYG000000959_45_9 | 7841 | 9034 | + | GT4 |
| NULL(UNKNOWN) | MGYG000000959_45 | MGYG000000959_45_10 | 9042 | 11510 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000959_45 | MGYG000000959_45_11 | 11519 | 12487 | + | GT2 |
| CAZyme | MGYG000000959_45 | MGYG000000959_45_12 | 12501 | 13628 | + | GT4 |
| TC | MGYG000000959_45 | MGYG000000959_45_13 | 13648 | 14580 | + | 9.B.102.7.10 |
| peptidase | MGYG000000959_45 | MGYG000000959_45_14 | 14613 | 15230 | + | S33.UPW |
| TF | MGYG000000959_45 | MGYG000000959_45_15 | 15469 | 16455 | - | HTH_11 |
| TC | MGYG000000959_45 | MGYG000000959_45_16 | 16459 | 19041 | - | 3.A.3.2.21 |
Gene ID: MGYG000000959_45_3
Type: TC
Location: 1926 - 2702 (+)
Type: TC
Location: 1926 - 2702 (+)
Gene ID: MGYG000000959_45_4
Type: TC
Location: 2702 - 3949 (+)
Type: TC
Location: 2702 - 3949 (+)
Gene ID: MGYG000000959_45_5
Type: pfam
Location: 3946 - 5040 (+)
Type: pfam
Location: 3946 - 5040 (+)
Gene ID: MGYG000000959_45_6
Type:
Location: 5052 - 5555 (+)
Type:
Location: 5052 - 5555 (+)
Gene ID: MGYG000000959_45_7
Type: CAZyme
Location: 5552 - 6637 (+)
Type: CAZyme
Location: 5552 - 6637 (+)
Gene ID: MGYG000000959_45_8
Type: CAZyme
Location: 6634 - 7836 (+)
Type: CAZyme
Location: 6634 - 7836 (+)
Gene ID: MGYG000000959_45_9
Type: CAZyme
Location: 7841 - 9034 (+)
Type: CAZyme
Location: 7841 - 9034 (+)
Gene ID: MGYG000000959_45_10
Type:
Location: 9042 - 11510 (+)
Type:
Location: 9042 - 11510 (+)
Gene ID: MGYG000000959_45_11
Type: CAZyme
Location: 11519 - 12487 (+)
Type: CAZyme
Location: 11519 - 12487 (+)
Gene ID: MGYG000000959_45_12
Type: CAZyme
Location: 12501 - 13628 (+)
Type: CAZyme
Location: 12501 - 13628 (+)
Gene ID: MGYG000000959_45_13
Type: TC
Location: 13648 - 14580 (+)
Type: TC
Location: 13648 - 14580 (+)
Gene ID: MGYG000000959_45_14
Type: peptidase
Location: 14613 - 15230 (+)
Type: peptidase
Location: 14613 - 15230 (+)
Gene ID: MGYG000000959_45_15
Type: TF
Location: 15469 - 16455 (-)
Type: TF
Location: 15469 - 16455 (-)
Gene ID: MGYG000000959_45_16
Type: TC
Location: 16459 - 19041 (-)
Type: TC
Location: 16459 - 19041 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900752785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.