Cluster: MGYG000000959_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000959
- CGC Family ID: CGCFAM_06321
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000959_25 | MGYG000000959_25_1 | 119 | 3331 | + | CBM22 | CE1 | GH10 |
| CAZyme | MGYG000000959_25 | MGYG000000959_25_2 | 3579 | 4715 | + | GH18 |
| TF | MGYG000000959_25 | MGYG000000959_25_3 | 4917 | 5300 | + | GntR |
| TC | MGYG000000959_25 | MGYG000000959_25_4 | 5293 | 6189 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | MGYG000000959_25 | MGYG000000959_25_5 | 6182 | 6979 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000959_25 | MGYG000000959_25_6 | 6993 | 7712 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000959_25 | MGYG000000959_25_7 | 7966 | 10062 | + | GH3 |
Gene ID: MGYG000000959_25_1
Type: CAZyme
Location: 119 - 3331 (+)
Type: CAZyme
Location: 119 - 3331 (+)
Gene ID: MGYG000000959_25_2
Type: CAZyme
Location: 3579 - 4715 (+)
Type: CAZyme
Location: 3579 - 4715 (+)
Gene ID: MGYG000000959_25_3
Type: TF
Location: 4917 - 5300 (+)
Type: TF
Location: 4917 - 5300 (+)
Gene ID: MGYG000000959_25_4
Type: TC
Location: 5293 - 6189 (+)
Type: TC
Location: 5293 - 6189 (+)
Gene ID: MGYG000000959_25_5
Type:
Location: 6182 - 6979 (+)
Type:
Location: 6182 - 6979 (+)
Gene ID: MGYG000000959_25_6
Type:
Location: 6993 - 7712 (+)
Type:
Location: 6993 - 7712 (+)
Gene ID: MGYG000000959_25_7
Type: CAZyme
Location: 7966 - 10062 (+)
Type: CAZyme
Location: 7966 - 10062 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900752785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.