Cluster: MGYG000000959_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000959
- CGC Family ID: CGCFAM_00317
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000959_1 | MGYG000000959_1_41 | 46431 | 46832 | + | 1.A.22.1.1 |
| pfam | MGYG000000959_1 | MGYG000000959_1_42 | 47413 | 48285 | + | Hydrolase_2 |
| TC | MGYG000000959_1 | MGYG000000959_1_43 | 48610 | 50001 | + | 9.B.18.1.3 |
| pfam | MGYG000000959_1 | MGYG000000959_1_44 | 49998 | 51062 | + | NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix |
| pfam | MGYG000000959_1 | MGYG000000959_1_45 | 51077 | 52114 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000000959_1 | MGYG000000959_1_46 | 52153 | 53295 | + | GT4 |
| CAZyme | MGYG000000959_1 | MGYG000000959_1_47 | 53295 | 54419 | + | GT4 |
Gene ID: MGYG000000959_1_41
Type: TC
Location: 46431 - 46832 (+)
Type: TC
Location: 46431 - 46832 (+)
Gene ID: MGYG000000959_1_42
Type: pfam
Location: 47413 - 48285 (+)
Type: pfam
Location: 47413 - 48285 (+)
Gene ID: MGYG000000959_1_43
Type: TC
Location: 48610 - 50001 (+)
Type: TC
Location: 48610 - 50001 (+)
Gene ID: MGYG000000959_1_44
Type: pfam
Location: 49998 - 51062 (+)
Type: pfam
Location: 49998 - 51062 (+)
Gene ID: MGYG000000959_1_45
Type: pfam
Location: 51077 - 52114 (+)
Type: pfam
Location: 51077 - 52114 (+)
Gene ID: MGYG000000959_1_46
Type: CAZyme
Location: 52153 - 53295 (+)
Type: CAZyme
Location: 52153 - 53295 (+)
Gene ID: MGYG000000959_1_47
Type: CAZyme
Location: 53295 - 54419 (+)
Type: CAZyme
Location: 53295 - 54419 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900752785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.