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Cluster: MGYG000000956_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000956_3 MGYG000000956_3_41 45766 48285 - GH2
pfam MGYG000000956_3 MGYG000000956_3_42 48593 49528 + MMR_HSR1 | RsgA_GTPase | RsgA_N
NULL(UNKNOWN) MGYG000000956_3 MGYG000000956_3_43 49697 49900 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000956_3 MGYG000000956_3_44 50044 51696 - 4.C.1.1.4
pfam MGYG000000956_3 MGYG000000956_3_45 51858 53186 + UPF0004 | Radical_SAM
pfam MGYG000000956_3 MGYG000000956_3_46 53183 54097 + Lip_A_acyltrans
CAZyme MGYG000000956_3 MGYG000000956_3_47 54094 55101 + GT2
STP MGYG000000956_3 MGYG000000956_3_48 55264 56538 + PALP
CAZyme MGYG000000956_3 MGYG000000956_3_49 56544 57425 - GH73
Gene ID: MGYG000000956_3_41
Type: CAZyme
Location: 45766 - 48285 (-)
Gene ID: MGYG000000956_3_42
Type: pfam
Location: 48593 - 49528 (+)
Gene ID: MGYG000000956_3_43
Type:
Location: 49697 - 49900 (-)
Gene ID: MGYG000000956_3_44
Type: TC
Location: 50044 - 51696 (-)
Gene ID: MGYG000000956_3_45
Type: pfam
Location: 51858 - 53186 (+)
Gene ID: MGYG000000956_3_46
Type: pfam
Location: 53183 - 54097 (+)
Gene ID: MGYG000000956_3_47
Type: CAZyme
Location: 54094 - 55101 (+)
Gene ID: MGYG000000956_3_48
Type: STP
Location: 55264 - 56538 (+)
Gene ID: MGYG000000956_3_49
Type: CAZyme
Location: 56544 - 57425 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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