Cluster: MGYG000000956_CGC18
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000956
- CGC Family ID: CGCFAM_09659
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000956_1 | MGYG000000956_1_1028 | 1239017 | 1240435 | - | 9.B.18.1.3 |
| pfam | MGYG000000956_1 | MGYG000000956_1_1029 | 1240432 | 1241004 | - | Sua5_yciO_yrdC |
| pfam | MGYG000000956_1 | MGYG000000956_1_1030 | 1241165 | 1241977 | + | Patatin |
| CAZyme | MGYG000000956_1 | MGYG000000956_1_1031 | 1241992 | 1243713 | + | GH13_38 |
| STP | MGYG000000956_1 | MGYG000000956_1_1032 | 1243751 | 1244731 | + | Pribosyltran |
| TC | MGYG000000956_1 | MGYG000000956_1_1033 | 1245085 | 1247043 | + | 2.A.67.4.2 |
| pfam | MGYG000000956_1 | MGYG000000956_1_1034 | 1247137 | 1248420 | + | SDH_alpha |
| NULL(UNKNOWN) | MGYG000000956_1 | MGYG000000956_1_1035 | 1248532 | 1249623 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000956_1 | MGYG000000956_1_1036 | 1249858 | 1251075 | + | 2.A.1.2.97 |
Gene ID: MGYG000000956_1_1028
Type: TC
Location: 1239017 - 1240435 (-)
Type: TC
Location: 1239017 - 1240435 (-)
Gene ID: MGYG000000956_1_1029
Type: pfam
Location: 1240432 - 1241004 (-)
Type: pfam
Location: 1240432 - 1241004 (-)
Gene ID: MGYG000000956_1_1030
Type: pfam
Location: 1241165 - 1241977 (+)
Type: pfam
Location: 1241165 - 1241977 (+)
Gene ID: MGYG000000956_1_1031
Type: CAZyme
Location: 1241992 - 1243713 (+)
Type: CAZyme
Location: 1241992 - 1243713 (+)
Gene ID: MGYG000000956_1_1032
Type: STP
Location: 1243751 - 1244731 (+)
Type: STP
Location: 1243751 - 1244731 (+)
Gene ID: MGYG000000956_1_1033
Type: TC
Location: 1245085 - 1247043 (+)
Type: TC
Location: 1245085 - 1247043 (+)
Gene ID: MGYG000000956_1_1034
Type: pfam
Location: 1247137 - 1248420 (+)
Type: pfam
Location: 1247137 - 1248420 (+)
Gene ID: MGYG000000956_1_1035
Type:
Location: 1248532 - 1249623 (-)
Type:
Location: 1248532 - 1249623 (-)
Gene ID: MGYG000000956_1_1036
Type: TC
Location: 1249858 - 1251075 (+)
Type: TC
Location: 1249858 - 1251075 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A sp900538705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.