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Cluster: MGYG000000952_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000952_8 MGYG000000952_8_13 13658 14827 - GT4
pfam MGYG000000952_8 MGYG000000952_8_14 14805 16139 - LPG_synthase_TM
TC MGYG000000952_8 MGYG000000952_8_15 16243 17166 - 3.A.1.3.20
TC MGYG000000952_8 MGYG000000952_8_16 17166 17948 - 3.A.1.3.20
STP MGYG000000952_8 MGYG000000952_8_17 17952 18854 - SBP_bac_3
NULL(UNKNOWN) MGYG000000952_8 MGYG000000952_8_18 19210 20361 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000952_8 MGYG000000952_8_19 20422 21795 - 3.A.1.5.19
TC MGYG000000952_8 MGYG000000952_8_20 21796 23787 - 3.A.1.5.25
TC MGYG000000952_8 MGYG000000952_8_21 23789 25819 - 3.A.1.5.19
TC MGYG000000952_8 MGYG000000952_8_22 25776 26825 - 3.A.1.5.19
Gene ID: MGYG000000952_8_13
Type: CAZyme
Location: 13658 - 14827 (-)
Gene ID: MGYG000000952_8_14
Type: pfam
Location: 14805 - 16139 (-)
Gene ID: MGYG000000952_8_15
Type: TC
Location: 16243 - 17166 (-)
Gene ID: MGYG000000952_8_16
Type: TC
Location: 17166 - 17948 (-)
Gene ID: MGYG000000952_8_17
Type: STP
Location: 17952 - 18854 (-)
Gene ID: MGYG000000952_8_18
Type:
Location: 19210 - 20361 (+)
Gene ID: MGYG000000952_8_19
Type: TC
Location: 20422 - 21795 (-)
Gene ID: MGYG000000952_8_20
Type: TC
Location: 21796 - 23787 (-)
Gene ID: MGYG000000952_8_21
Type: TC
Location: 23789 - 25819 (-)
Gene ID: MGYG000000952_8_22
Type: TC
Location: 25776 - 26825 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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