Cluster: MGYG000000952_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: MGYG000000952
- CGC Family ID: CGCFAM_00106
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000952_3 | MGYG000000952_3_21 | 19481 | 20995 | + | GH77 |
| pfam | MGYG000000952_3 | MGYG000000952_3_22 | 21053 | 22309 | + | SBP_bac_8 |
| TC | MGYG000000952_3 | MGYG000000952_3_23 | 22365 | 23924 | + | 3.A.1.1.27 |
| TC | MGYG000000952_3 | MGYG000000952_3_24 | 23924 | 24787 | + | 3.A.1.1.27 |
| CAZyme | MGYG000000952_3 | MGYG000000952_3_25 | 24792 | 26408 | + | GH13_36 |
| TC | MGYG000000952_3 | MGYG000000952_3_26 | 26421 | 28952 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | MGYG000000952_3 | MGYG000000952_3_27 | 28965 | 29555 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000000952_3 | MGYG000000952_3_28 | 29542 | 30234 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000952_3 | MGYG000000952_3_29 | 30246 | 33278 | + | GH13_14 |
| pfam | MGYG000000952_3 | MGYG000000952_3_30 | 33290 | 34474 | + | CBM26 |
| TF | MGYG000000952_3 | MGYG000000952_3_31 | 34556 | 34840 | - | HTH_3 |
| TC | MGYG000000952_3 | MGYG000000952_3_32 | 34959 | 35501 | + | 3.A.11.1.4 |
Gene ID: MGYG000000952_3_21
Type: CAZyme
Location: 19481 - 20995 (+)
Type: CAZyme
Location: 19481 - 20995 (+)
Gene ID: MGYG000000952_3_22
Type: pfam
Location: 21053 - 22309 (+)
Type: pfam
Location: 21053 - 22309 (+)
Gene ID: MGYG000000952_3_23
Type: TC
Location: 22365 - 23924 (+)
Type: TC
Location: 22365 - 23924 (+)
Gene ID: MGYG000000952_3_24
Type: TC
Location: 23924 - 24787 (+)
Type: TC
Location: 23924 - 24787 (+)
Gene ID: MGYG000000952_3_25
Type: CAZyme
Location: 24792 - 26408 (+)
Type: CAZyme
Location: 24792 - 26408 (+)
Gene ID: MGYG000000952_3_26
Type: TC
Location: 26421 - 28952 (+)
Type: TC
Location: 26421 - 28952 (+)
Gene ID: MGYG000000952_3_27
Type:
Location: 28965 - 29555 (+)
Type:
Location: 28965 - 29555 (+)
Gene ID: MGYG000000952_3_28
Type:
Location: 29542 - 30234 (+)
Type:
Location: 29542 - 30234 (+)
Gene ID: MGYG000000952_3_29
Type: CAZyme
Location: 30246 - 33278 (+)
Type: CAZyme
Location: 30246 - 33278 (+)
Gene ID: MGYG000000952_3_30
Type: pfam
Location: 33290 - 34474 (+)
Type: pfam
Location: 33290 - 34474 (+)
Gene ID: MGYG000000952_3_31
Type: TF
Location: 34556 - 34840 (-)
Type: TF
Location: 34556 - 34840 (-)
Gene ID: MGYG000000952_3_32
Type: TC
Location: 34959 - 35501 (+)
Type: TC
Location: 34959 - 35501 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-826
Genus
Onthovivens
Species
Onthovivens sp900540365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.