Cluster: MGYG000000940_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000940
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000940_34 | MGYG000000940_34_2 | 2018 | 3445 | + | 4.A.1.2.11 |
| CAZyme | MGYG000000940_34 | MGYG000000940_34_3 | 3657 | 4970 | + | GH140 |
| NULL(UNKNOWN) | MGYG000000940_34 | MGYG000000940_34_4 | 5287 | 6144 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000000940_34 | MGYG000000940_34_5 | 6141 | 6830 | + | GerE |
| TC | MGYG000000940_34 | MGYG000000940_34_6 | 7012 | 9780 | - | 3.A.3.4.1 |
Gene ID: MGYG000000940_34_2
Type: TC
Location: 2018 - 3445 (+)
Type: TC
Location: 2018 - 3445 (+)
Gene ID: MGYG000000940_34_3
Type: CAZyme
Location: 3657 - 4970 (+)
Type: CAZyme
Location: 3657 - 4970 (+)
Gene ID: MGYG000000940_34_4
Type:
Location: 5287 - 6144 (+)
Type:
Location: 5287 - 6144 (+)
Gene ID: MGYG000000940_34_5
Type: TF
Location: 6141 - 6830 (+)
Type: TF
Location: 6141 - 6830 (+)
Gene ID: MGYG000000940_34_6
Type: TC
Location: 7012 - 9780 (-)
Type: TC
Location: 7012 - 9780 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900548935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.