Cluster: MGYG000000940_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000940
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000940_12 | MGYG000000940_12_18 | 12305 | 13726 | - | GH1 |
| TC | MGYG000000940_12 | MGYG000000940_12_19 | 13803 | 15581 | - | 4.A.3.1.1 |
| TF | MGYG000000940_12 | MGYG000000940_12_20 | 15857 | 16867 | + | LacI |
| CAZyme | MGYG000000940_12 | MGYG000000940_12_21 | 17230 | 18669 | - | GH1 |
| TC | MGYG000000940_12 | MGYG000000940_12_22 | 18736 | 20508 | - | 4.A.3.1.1 |
| TF | MGYG000000940_12 | MGYG000000940_12_23 | 20866 | 21870 | + | LacI |
| TC | MGYG000000940_12 | MGYG000000940_12_24 | 22085 | 22423 | + | 4.A.3.1.2 |
Gene ID: MGYG000000940_12_18
Type: CAZyme
Location: 12305 - 13726 (-)
Type: CAZyme
Location: 12305 - 13726 (-)
Gene ID: MGYG000000940_12_19
Type: TC
Location: 13803 - 15581 (-)
Type: TC
Location: 13803 - 15581 (-)
Gene ID: MGYG000000940_12_20
Type: TF
Location: 15857 - 16867 (+)
Type: TF
Location: 15857 - 16867 (+)
Gene ID: MGYG000000940_12_21
Type: CAZyme
Location: 17230 - 18669 (-)
Type: CAZyme
Location: 17230 - 18669 (-)
Gene ID: MGYG000000940_12_22
Type: TC
Location: 18736 - 20508 (-)
Type: TC
Location: 18736 - 20508 (-)
Gene ID: MGYG000000940_12_23
Type: TF
Location: 20866 - 21870 (+)
Type: TF
Location: 20866 - 21870 (+)
Gene ID: MGYG000000940_12_24
Type: TC
Location: 22085 - 22423 (+)
Type: TC
Location: 22085 - 22423 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900548935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.