Cluster: MGYG000000919_CGC54
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00414
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000919_36 | MGYG000000919_36_7 | 6732 | 8483 | - | CBM34 | GH13_20 |
| CAZyme | MGYG000000919_36 | MGYG000000919_36_8 | 8499 | 9944 | - | GH77 |
| CAZyme | MGYG000000919_36 | MGYG000000919_36_9 | 9955 | 12213 | - | GT35 |
| TC | MGYG000000919_36 | MGYG000000919_36_10 | 12311 | 13978 | - | 3.A.1.1.9 |
| TC | MGYG000000919_36 | MGYG000000919_36_11 | 13982 | 15715 | - | 9.B.33.1.1 |
| TF | MGYG000000919_36 | MGYG000000919_36_12 | 15687 | 17228 | - | HTH_AraC |
| TC | MGYG000000919_36 | MGYG000000919_36_13 | 17515 | 18378 | - | 3.A.1.1.27 |
| TC | MGYG000000919_36 | MGYG000000919_36_14 | 18375 | 19772 | - | 3.A.1.1.27 |
Gene ID: MGYG000000919_36_7
Type: CAZyme
Location: 6732 - 8483 (-)
Type: CAZyme
Location: 6732 - 8483 (-)
Gene ID: MGYG000000919_36_8
Type: CAZyme
Location: 8499 - 9944 (-)
Type: CAZyme
Location: 8499 - 9944 (-)
Gene ID: MGYG000000919_36_9
Type: CAZyme
Location: 9955 - 12213 (-)
Type: CAZyme
Location: 9955 - 12213 (-)
Gene ID: MGYG000000919_36_10
Type: TC
Location: 12311 - 13978 (-)
Type: TC
Location: 12311 - 13978 (-)
Gene ID: MGYG000000919_36_11
Type: TC
Location: 13982 - 15715 (-)
Type: TC
Location: 13982 - 15715 (-)
Gene ID: MGYG000000919_36_12
Type: TF
Location: 15687 - 17228 (-)
Type: TF
Location: 15687 - 17228 (-)
Gene ID: MGYG000000919_36_13
Type: TC
Location: 17515 - 18378 (-)
Type: TC
Location: 17515 - 18378 (-)
Gene ID: MGYG000000919_36_14
Type: TC
Location: 18375 - 19772 (-)
Type: TC
Location: 18375 - 19772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.