Cluster: MGYG000000919_CGC51
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000000919
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000919_29 | MGYG000000919_29_9 | 5144 | 6226 | + | CE17 |
| CAZyme | MGYG000000919_29 | MGYG000000919_29_10 | 6241 | 7293 | + | CE2 |
| TF | MGYG000000919_29 | MGYG000000919_29_11 | 7560 | 8579 | + | LacI |
| CAZyme | MGYG000000919_29 | MGYG000000919_29_12 | 8926 | 13608 | + | CBM23 | CBM27 | CBM59 | GH26 |
| TC | MGYG000000919_29 | MGYG000000919_29_13 | 13743 | 15767 | + | 1.B.52.2.1 |
| TC | MGYG000000919_29 | MGYG000000919_29_14 | 16028 | 17380 | + | 3.A.1.1.44 |
| TC | MGYG000000919_29 | MGYG000000919_29_15 | 17664 | 18605 | + | 3.A.1.1.28 |
| TC | MGYG000000919_29 | MGYG000000919_29_16 | 18609 | 19445 | + | 3.A.1.1.27 |
| CAZyme | MGYG000000919_29 | MGYG000000919_29_17 | 19482 | 20504 | + | GH130_2 |
| pfam | MGYG000000919_29 | MGYG000000919_29_18 | 20507 | 21703 | + | GlcNAc_2-epim |
| CAZyme | MGYG000000919_29 | MGYG000000919_29_19 | 21696 | 22877 | + | GH130_1 |
| CAZyme | MGYG000000919_29 | MGYG000000919_29_20 | 22880 | 23821 | + | GH113 |
| peptidase | MGYG000000919_29 | MGYG000000919_29_21 | 23943 | 25211 | - | S11.UPW |
| STP | MGYG000000919_29 | MGYG000000919_29_22 | 25467 | 26105 | + | TetR_N |
| TC | MGYG000000919_29 | MGYG000000919_29_23 | 26244 | 26987 | - | 3.A.1.17.1 |
| TC | MGYG000000919_29 | MGYG000000919_29_24 | 26984 | 27718 | - | 3.A.1.17.2 |
Gene ID: MGYG000000919_29_9
Type: CAZyme
Location: 5144 - 6226 (+)
Type: CAZyme
Location: 5144 - 6226 (+)
Gene ID: MGYG000000919_29_10
Type: CAZyme
Location: 6241 - 7293 (+)
Type: CAZyme
Location: 6241 - 7293 (+)
Gene ID: MGYG000000919_29_11
Type: TF
Location: 7560 - 8579 (+)
Type: TF
Location: 7560 - 8579 (+)
Gene ID: MGYG000000919_29_12
Type: CAZyme
Location: 8926 - 13608 (+)
Type: CAZyme
Location: 8926 - 13608 (+)
Gene ID: MGYG000000919_29_13
Type: TC
Location: 13743 - 15767 (+)
Type: TC
Location: 13743 - 15767 (+)
Gene ID: MGYG000000919_29_14
Type: TC
Location: 16028 - 17380 (+)
Type: TC
Location: 16028 - 17380 (+)
Gene ID: MGYG000000919_29_15
Type: TC
Location: 17664 - 18605 (+)
Type: TC
Location: 17664 - 18605 (+)
Gene ID: MGYG000000919_29_16
Type: TC
Location: 18609 - 19445 (+)
Type: TC
Location: 18609 - 19445 (+)
Gene ID: MGYG000000919_29_17
Type: CAZyme
Location: 19482 - 20504 (+)
Type: CAZyme
Location: 19482 - 20504 (+)
Gene ID: MGYG000000919_29_18
Type: pfam
Location: 20507 - 21703 (+)
Type: pfam
Location: 20507 - 21703 (+)
Gene ID: MGYG000000919_29_19
Type: CAZyme
Location: 21696 - 22877 (+)
Type: CAZyme
Location: 21696 - 22877 (+)
Gene ID: MGYG000000919_29_20
Type: CAZyme
Location: 22880 - 23821 (+)
Type: CAZyme
Location: 22880 - 23821 (+)
Gene ID: MGYG000000919_29_21
Type: peptidase
Location: 23943 - 25211 (-)
Type: peptidase
Location: 23943 - 25211 (-)
Gene ID: MGYG000000919_29_22
Type: STP
Location: 25467 - 26105 (+)
Type: STP
Location: 25467 - 26105 (+)
Gene ID: MGYG000000919_29_23
Type: TC
Location: 26244 - 26987 (-)
Type: TC
Location: 26244 - 26987 (-)
Gene ID: MGYG000000919_29_24
Type: TC
Location: 26984 - 27718 (-)
Type: TC
Location: 26984 - 27718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.