Cluster: MGYG000000919_CGC50
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_10033
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_28 | MGYG000000919_28_8 | 4738 | 6297 | - | 3.A.1.12.8 |
| TC | MGYG000000919_28 | MGYG000000919_28_9 | 6299 | 7423 | - | 3.A.1.12.3 |
| TF | MGYG000000919_28 | MGYG000000919_28_10 | 7546 | 8181 | - | GntR |
| CAZyme | MGYG000000919_28 | MGYG000000919_28_11 | 8406 | 11531 | - | GH38 |
| CAZyme | MGYG000000919_28 | MGYG000000919_28_12 | 11559 | 12548 | - | GH130_2 |
| TF | MGYG000000919_28 | MGYG000000919_28_13 | 12576 | 13592 | - | LacI |
| pfam | MGYG000000919_28 | MGYG000000919_28_14 | 13685 | 16237 | - | Transglut_core |
| CAZyme | MGYG000000919_28 | MGYG000000919_28_15 | 16250 | 17281 | - | CBM9 |
| CAZyme | MGYG000000919_28 | MGYG000000919_28_16 | 17301 | 18587 | - | GH29 |
| peptidase | MGYG000000919_28 | MGYG000000919_28_17 | 18601 | 20019 | - | M17.UPW |
| CAZyme | MGYG000000919_28 | MGYG000000919_28_18 | 20053 | 21072 | - | GH18 |
| TC | MGYG000000919_28 | MGYG000000919_28_19 | 21210 | 22058 | - | 2.A.115.1.5 |
| TC | MGYG000000919_28 | MGYG000000919_28_20 | 22126 | 23694 | - | 3.A.1.1.9 |
| TC | MGYG000000919_28 | MGYG000000919_28_21 | 23790 | 24704 | - | 3.A.1.1.10 |
| TC | MGYG000000919_28 | MGYG000000919_28_22 | 24722 | 25672 | - | 3.A.1.1.10 |
| TC | MGYG000000919_28 | MGYG000000919_28_23 | 26182 | 27282 | - | 2.A.120.1.10 |
Gene ID: MGYG000000919_28_8
Type: TC
Location: 4738 - 6297 (-)
Type: TC
Location: 4738 - 6297 (-)
Gene ID: MGYG000000919_28_9
Type: TC
Location: 6299 - 7423 (-)
Type: TC
Location: 6299 - 7423 (-)
Gene ID: MGYG000000919_28_10
Type: TF
Location: 7546 - 8181 (-)
Type: TF
Location: 7546 - 8181 (-)
Gene ID: MGYG000000919_28_11
Type: CAZyme
Location: 8406 - 11531 (-)
Type: CAZyme
Location: 8406 - 11531 (-)
Gene ID: MGYG000000919_28_12
Type: CAZyme
Location: 11559 - 12548 (-)
Type: CAZyme
Location: 11559 - 12548 (-)
Gene ID: MGYG000000919_28_13
Type: TF
Location: 12576 - 13592 (-)
Type: TF
Location: 12576 - 13592 (-)
Gene ID: MGYG000000919_28_14
Type: pfam
Location: 13685 - 16237 (-)
Type: pfam
Location: 13685 - 16237 (-)
Gene ID: MGYG000000919_28_15
Type: CAZyme
Location: 16250 - 17281 (-)
Type: CAZyme
Location: 16250 - 17281 (-)
Gene ID: MGYG000000919_28_16
Type: CAZyme
Location: 17301 - 18587 (-)
Type: CAZyme
Location: 17301 - 18587 (-)
Gene ID: MGYG000000919_28_17
Type: peptidase
Location: 18601 - 20019 (-)
Type: peptidase
Location: 18601 - 20019 (-)
Gene ID: MGYG000000919_28_18
Type: CAZyme
Location: 20053 - 21072 (-)
Type: CAZyme
Location: 20053 - 21072 (-)
Gene ID: MGYG000000919_28_19
Type: TC
Location: 21210 - 22058 (-)
Type: TC
Location: 21210 - 22058 (-)
Gene ID: MGYG000000919_28_20
Type: TC
Location: 22126 - 23694 (-)
Type: TC
Location: 22126 - 23694 (-)
Gene ID: MGYG000000919_28_21
Type: TC
Location: 23790 - 24704 (-)
Type: TC
Location: 23790 - 24704 (-)
Gene ID: MGYG000000919_28_22
Type: TC
Location: 24722 - 25672 (-)
Type: TC
Location: 24722 - 25672 (-)
Gene ID: MGYG000000919_28_23
Type: TC
Location: 26182 - 27282 (-)
Type: TC
Location: 26182 - 27282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.