Cluster: MGYG000000919_CGC47
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_01990
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000919_22 | MGYG000000919_22_17 | 12908 | 16033 | + | GH161 |
| CAZyme | MGYG000000919_22 | MGYG000000919_22_18 | 16045 | 17409 | + | GH1 |
| TC | MGYG000000919_22 | MGYG000000919_22_19 | 17517 | 18470 | + | 3.A.1.1.29 |
| TC | MGYG000000919_22 | MGYG000000919_22_20 | 18484 | 19383 | + | 3.A.1.1.29 |
| pfam | MGYG000000919_22 | MGYG000000919_22_21 | 19429 | 21105 | + | SBP_bac_1 |
| TC | MGYG000000919_22 | MGYG000000919_22_22 | 21247 | 23052 | + | 8.A.59.2.1 |
Gene ID: MGYG000000919_22_17
Type: CAZyme
Location: 12908 - 16033 (+)
Type: CAZyme
Location: 12908 - 16033 (+)
Gene ID: MGYG000000919_22_18
Type: CAZyme
Location: 16045 - 17409 (+)
Type: CAZyme
Location: 16045 - 17409 (+)
Gene ID: MGYG000000919_22_19
Type: TC
Location: 17517 - 18470 (+)
Type: TC
Location: 17517 - 18470 (+)
Gene ID: MGYG000000919_22_20
Type: TC
Location: 18484 - 19383 (+)
Type: TC
Location: 18484 - 19383 (+)
Gene ID: MGYG000000919_22_21
Type: pfam
Location: 19429 - 21105 (+)
Type: pfam
Location: 19429 - 21105 (+)
Gene ID: MGYG000000919_22_22
Type: TC
Location: 21247 - 23052 (+)
Type: TC
Location: 21247 - 23052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.