Cluster: MGYG000000919_CGC42
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00680
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_16 | MGYG000000919_16_63 | 63948 | 64778 | - | 3.A.1.1.45 |
| TC | MGYG000000919_16 | MGYG000000919_16_64 | 64778 | 65659 | - | 3.A.1.1.11 |
| STP | MGYG000000919_16 | MGYG000000919_16_65 | 65733 | 67034 | - | SBP_bac_1 |
| CAZyme | MGYG000000919_16 | MGYG000000919_16_66 | 67245 | 68726 | - | GH31_19 |
| TF | MGYG000000919_16 | MGYG000000919_16_67 | 68806 | 70344 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000000919_16 | MGYG000000919_16_68 | 70319 | 72115 | - | 9.B.33.1.1 |
| TC | MGYG000000919_16 | MGYG000000919_16_69 | 72293 | 74458 | - | 4.A.1.1.9 |
Gene ID: MGYG000000919_16_63
Type: TC
Location: 63948 - 64778 (-)
Type: TC
Location: 63948 - 64778 (-)
Gene ID: MGYG000000919_16_64
Type: TC
Location: 64778 - 65659 (-)
Type: TC
Location: 64778 - 65659 (-)
Gene ID: MGYG000000919_16_65
Type: STP
Location: 65733 - 67034 (-)
Type: STP
Location: 65733 - 67034 (-)
Gene ID: MGYG000000919_16_66
Type: CAZyme
Location: 67245 - 68726 (-)
Type: CAZyme
Location: 67245 - 68726 (-)
Gene ID: MGYG000000919_16_67
Type: TF
Location: 68806 - 70344 (-)
Type: TF
Location: 68806 - 70344 (-)
Gene ID: MGYG000000919_16_68
Type: TC
Location: 70319 - 72115 (-)
Type: TC
Location: 70319 - 72115 (-)
Gene ID: MGYG000000919_16_69
Type: TC
Location: 72293 - 74458 (-)
Type: TC
Location: 72293 - 74458 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.