Cluster: MGYG000000919_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00223
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000919_1 | MGYG000000919_1_246 | 288524 | 292081 | - | 3.A.24.3.1 |
| TF | MGYG000000919_1 | MGYG000000919_1_247 | 292430 | 293158 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000000919_1 | MGYG000000919_1_248 | 293209 | 294927 | + | 8.A.59.2.1 |
| NULL(UNKNOWN) | MGYG000000919_1 | MGYG000000919_1_249 | 294953 | 296641 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000919_1 | MGYG000000919_1_250 | 296661 | 297554 | - | 3.A.1.1.29 |
| TC | MGYG000000919_1 | MGYG000000919_1_251 | 297566 | 298471 | - | 3.A.1.1.10 |
| CAZyme | MGYG000000919_1 | MGYG000000919_1_252 | 298710 | 300458 | + | GH163 |
Gene ID: MGYG000000919_1_246
Type: TC
Location: 288524 - 292081 (-)
Type: TC
Location: 288524 - 292081 (-)
Gene ID: MGYG000000919_1_247
Type: TF
Location: 292430 - 293158 (-)
Type: TF
Location: 292430 - 293158 (-)
Gene ID: MGYG000000919_1_248
Type: TC
Location: 293209 - 294927 (+)
Type: TC
Location: 293209 - 294927 (+)
Gene ID: MGYG000000919_1_249
Type:
Location: 294953 - 296641 (-)
Type:
Location: 294953 - 296641 (-)
Gene ID: MGYG000000919_1_250
Type: TC
Location: 296661 - 297554 (-)
Type: TC
Location: 296661 - 297554 (-)
Gene ID: MGYG000000919_1_251
Type: TC
Location: 297566 - 298471 (-)
Type: TC
Location: 297566 - 298471 (-)
Gene ID: MGYG000000919_1_252
Type: CAZyme
Location: 298710 - 300458 (+)
Type: CAZyme
Location: 298710 - 300458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.