Cluster: MGYG000000919_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000919
- CGC Family ID: CGCFAM_00133
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000919_12 | MGYG000000919_12_26 | 31980 | 33353 | - | GH29 |
| TC | MGYG000000919_12 | MGYG000000919_12_27 | 33434 | 35233 | - | 8.A.59.2.1 |
| TF | MGYG000000919_12 | MGYG000000919_12_28 | 35246 | 36310 | - | HTH_AraC |
| STP | MGYG000000919_12 | MGYG000000919_12_29 | 36528 | 38093 | + | SBP_bac_1 |
| TC | MGYG000000919_12 | MGYG000000919_12_30 | 38389 | 39369 | + | 3.A.1.1.10 |
| TC | MGYG000000919_12 | MGYG000000919_12_31 | 39381 | 40286 | + | 3.A.1.1.10 |
| TC | MGYG000000919_12 | MGYG000000919_12_32 | 40340 | 41998 | + | 3.A.1.1.29 |
Gene ID: MGYG000000919_12_26
Type: CAZyme
Location: 31980 - 33353 (-)
Type: CAZyme
Location: 31980 - 33353 (-)
Gene ID: MGYG000000919_12_27
Type: TC
Location: 33434 - 35233 (-)
Type: TC
Location: 33434 - 35233 (-)
Gene ID: MGYG000000919_12_28
Type: TF
Location: 35246 - 36310 (-)
Type: TF
Location: 35246 - 36310 (-)
Gene ID: MGYG000000919_12_29
Type: STP
Location: 36528 - 38093 (+)
Type: STP
Location: 36528 - 38093 (+)
Gene ID: MGYG000000919_12_30
Type: TC
Location: 38389 - 39369 (+)
Type: TC
Location: 38389 - 39369 (+)
Gene ID: MGYG000000919_12_31
Type: TC
Location: 39381 - 40286 (+)
Type: TC
Location: 39381 - 40286 (+)
Gene ID: MGYG000000919_12_32
Type: TC
Location: 40340 - 41998 (+)
Type: TC
Location: 40340 - 41998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Cellulosilyticaceae
Genus
Holtiella
Species
Holtiella sp900551325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.